Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 >seq2 Length=1666313 Score = 150 bits (166), Expect = 2e-31 Identities = 298/431 (69%), Gaps = 14/431 (3%) Strand=Plus/Minus Query 159377 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATC 159434 |||| |||||||| | |||||||| |||| ||| || ||||| |||||||| || || Sbjct 1326375 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 1326318 Query 159435 AGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGA 159494 || | ||| | || |||||||||| || || ||| | |||| || || Sbjct 1326317 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 1326258 Query 159495 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 159550 | ||||| || | ||||| | | || |||| || |||| || | ||||| Sbjct 1326257 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 1326202 Query 159551 TGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAG 159609 ||||||| ||||||||||| ||||| |||||||| || ||| || || ||| | | Sbjct 1326201 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCAAGAGAGCTAT-TGAT 1326143 Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669 ||||||||||| |||||||| || |||||||||||||| ||| | ||||| || || Sbjct 1326142 ATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAGTT 1326083 Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729 ||| || | ||| |||| | ||||| ||||| |||||| | || | ||||| || Sbjct 1326082 GGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAACT 1326023 Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789 || | | ||||||||||| ||||| || || || || |||| | ||||| Sbjct 1326022 TTTGCTTTGAGTCATGGAGGTGGTGGTCCAGGTCAAGCACCAGTTTGTGTTAAAGAACAT 1325963 Query 159790 CTCACACCATT 159800 | | |||||| Sbjct 1325962 TTAAAACCATT 1325952 Score = 138 bits (152), Expect = 1e-27 Identities = 195/274 (71%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480 ||| ||||| | |||| | ||||| |||||| |||| | || || || ||||| || Sbjct 1327349 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 1327290 Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 ||||||||| || ||||| || || ||| ||||| || || || |||||||| || Sbjct 1327289 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 1327230 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | || |||||| ||| || ||| | | ||||| |||| |||||||| || Sbjct 1327229 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 1327170 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 ||||| | |||||| ||||| || ||| ||||| || ||||||||| || ||||||| Sbjct 1327169 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 1327110 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCA 158694 || |||| ||||| | ||||||||| || Sbjct 1327109 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 1327076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050097404000