Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
>seq2
Length=1666313
Score = 150 bits (166), Expect = 2e-31
Identities = 298/431 (69%), Gaps = 14/431 (3%)
Strand=Plus/Minus
Query 159377 ATGATAAAAGAAATGTATGTTTGATACCAG--AGTCAGCACATGGAACTAATCCTGCATC 159434
|||| |||||||| | |||||||| |||| ||| || ||||| |||||||| || ||
Sbjct 1326375 ATGAACAAAGAAATATTTGTTTGATTCCAGTTAGT--GCTCATGGTACTAATCCAGCTTC 1326318
Query 159435 AGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGA 159494
|| | ||| | || |||||||||| || || ||| | |||| || ||
Sbjct 1326317 TGCTGCTATGTCTGGTTTGAAAGTTGTTCCAGTTAAATGTTTGTCTAATGGTTCTATTGA 1326258
Query 159495 CATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT-TG--AACT-GTCATGTATTA 159550
| ||||| || | ||||| | | || |||| || |||| || | |||||
Sbjct 1326257 TTTAGAAGATTTACAAGCTAAAGC--TGA--AAAACATGCTGCTAACTTGTGTTCTATTA 1326202
Query 159551 TGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAG 159609
||||||| ||||||||||| ||||| |||||||| || ||| || || ||| | |
Sbjct 1326201 TGATTACTTATCCATCTACTTATGGTTTATTTGAACCAGGTGTCAAGAGAGCTAT-TGAT 1326143
Query 159610 ATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTA 159669
||||||||||| |||||||| || |||||||||||||| ||| | ||||| || ||
Sbjct 1326142 ATTGTTCATGAACATGGTGGTTTAGTTTATCTTGATGGTGCCAATATGAATGCTCAAGTT 1326083
Query 159670 GGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACA 159729
||| || | ||| |||| | ||||| ||||| |||||| | || | ||||| ||
Sbjct 1326082 GGTTTAACTTCTCCAGGTGATTTAGGTGCTGATGTTTGTCATTTGAATATTCATAAAACT 1326023
Query 159730 TTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789
|| | | ||||||||||| ||||| || || || || |||| | |||||
Sbjct 1326022 TTTGCTTTGAGTCATGGAGGTGGTGGTCCAGGTCAAGCACCAGTTTGTGTTAAAGAACAT 1325963
Query 159790 CTCACACCATT 159800
| | ||||||
Sbjct 1325962 TTAAAACCATT 1325952
Score = 138 bits (152), Expect = 1e-27
Identities = 195/274 (71%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 158421 TGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCA 158480
||| ||||| | |||| | ||||| |||||| |||| | || || || ||||| ||
Sbjct 1327349 TGATATTGCATTGGGTACTTCTCAAAGATTTGGTGTTCCATTTGGTTATGGTGGTCCACA 1327290
Query 158481 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540
||||||||| || ||||| || || ||| ||||| || || || |||||||| ||
Sbjct 1327289 TGCTGCATTTTTCGCAACTTCATCTAAATATGCAAGAAAAATCCCAGGAAGAATTGTTGG 1327230
Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600
| || |||||| ||| || ||| | | ||||| |||| |||||||| ||
Sbjct 1327229 TATTTCTAAAGATAGATTAGGCAAACCAGCTTTACGTTTAGCTTTACAAACTAGAGAACA 1327170
Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660
||||| | |||||| ||||| || ||| ||||| || ||||||||| || |||||||
Sbjct 1327169 ACATATTAAAAGAGAAAAAGCTACTTCTAATATCTGTACTGCACAAGCATTGTTGGCTAA 1327110
Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCA 158694
|| |||| ||||| | ||||||||| ||
Sbjct 1327109 CATTTCTGCTAATTATGCTGTCTATCATGGTCCA 1327076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588050097404000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |