Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 269 3e-67
>seq1
Length=2377843
Score = 269 bits (298), Expect = 3e-67
Identities = 606/901 (67%), Gaps = 27/901 (3%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
|||||| || |||||| || || ||||| |||||||||| || || || || |
Sbjct 1803912 CATAACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGC 1803971
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA-----TAGTACTA 36986
| || ||||||||||| ||||| ||||| |||| ||| || | | ||
Sbjct 1803972 CAAGGAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAACTTTCTTGTTACC 1804031
Query 36987 CATGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCA 37046
|| | || | | | ||||| |||||| |||| | |||| |||||| | |||
Sbjct 1804032 CAAGGCAAATAAT-----AATCTATCAGCAACATATTCAACATATTGACACATCAAGTCA 1804086
Query 37047 TAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTAT 37105
|||| ||||| | || ||||||| ||||| |||| | || |||||| | ||
Sbjct 1804087 CAGTTCATACCCAATAAAGAAACTGGAAGAGCATCAGTGAA-ATATTCTTTTTCAAC-AT 1804144
Query 37106 TACAGCATCTTTAACTATA---TTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATA 37162
|| || ||| ||| ||| || ||| || |||| || ||| | || || |
Sbjct 1804145 --CAACAGCTTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTG 1804202
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||||| ||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1804203 GGAGAACAACAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATT 1804262
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282
|| || || || |||||||| |||||||| ||||| | ||| || || | ||||| ||
Sbjct 1804263 GGAGAAAGTCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGA 1804322
Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT---GTACCGAAAGT 37339
||| |||||||||||||||| || ||||| || || | | | | | ||||
Sbjct 1804323 ACCACTGAAGAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAG- 1804381
Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399
| || | ||| ||||||||| | | ||| || || || ||| |||| |||
Sbjct 1804382 -CATCT-TTATCTTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAAT 1804439
Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459
||||||| || || || | || | ||||| ||| | | |||||| |||||
Sbjct 1804440 GTTTTCAATGGCATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAAT 1804499
Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519
|| |||| |||||||||||| ||||| ||||| || || || |||||||| || |
Sbjct 1804500 TAATAAAGAATACATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGA 1804559
Query 37520 CCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTAT 37579
||||||| | | ||| || ||| | |||| | | | ||||||||| ||| ||
Sbjct 1804560 TTTAGCTTCTGGCAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAAT 1804619
Query 37580 CCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATT 37636
|||||| ||| || || || || | ||| | ||||| ||||||| |||||
Sbjct 1804620 ACCATCAGAAGCAGCGAAAAAGGCTAAAACTCTAGAAACAAAATATCTTTCATTGTCATT 1804679
Query 37637 TGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
| || || |||||||||| | |||||| |||||||||||| ||| ||||| ||
Sbjct 1804680 TAATTTGTTGTTCCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 1804739
Query 37697 ACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTAC 37756
|| || |||||| | |||| || |||| || || |||||||| || ||
Sbjct 1804740 GGAGGCTTCGGCTTTTTTATAGAAATTCCAGATTTCATGATATTTAATTGGAAACATAAC 1804799
Query 37757 A 37757
|
Sbjct 1804800 A 1804800
Score = 158 bits (174), Expect = 1e-33
Identities = 556/855 (65%), Gaps = 19/855 (2%)
Strand=Plus/Minus
Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966
|||| || ||||| || || || | | |||||||||||||| ||||||||||||||||
Sbjct 1025704 TTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAATGGATTAG 1025645
Query 36967 ATGTATTATATATAGTACTACATGAT--AATTCCTTCAGAAGCCTATCCGCAACAAATTC 37024
||||| ||| | | ||| | || | || | ||||| ||| | ||||
Sbjct 1025644 TCACGTTATA-ATACTTAT-CATTACCAAAAGCAACCAACAATCTATCGGCACAATATTC 1025587
Query 37025 TATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT-T 37083
| |||| |||||| | ||| | || ||||| | | ||||||| ||||| |
Sbjct 1025586 CACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCATCACT 1025527
Query 37084 GAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAACAATAACTTCTTCAG 37143
|||| | | |||| | || | ||||| || | | || || | |||| | |
Sbjct 1025526 GAAGTACTTCTTTT-CAATACTAACAGCTTCAGTGATAATCTTTTCTATAA--TGGAAGG 1025470
Query 37144 TTGGGGGATATTTT--AAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTC 37201
| || |||| | || ||| ||| | |||||| ||| |||| || | ||||||
Sbjct 1025469 ATCCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTC 1025410
Query 37202 ATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAAT 37261
|| |||| ||||||||||| || || ||||| |||||||| || ||||||||||| |
Sbjct 1025409 GTCCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAA 1025350
Query 37262 CCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTAC 37321
||| || || | || || || ||| |||||||| ||||||| || |||||||| ||
Sbjct 1025349 CCAGAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCAC 1025290
Query 37322 AAGAC---GTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGC 37378
| | || | || | | || | || ||||||| | | | |||||||||
Sbjct 1025289 CAATCTTTCTGCAAACAAGGCT--TCT-TCGTCTTGAATCCATCTAATAGCCCAATCTGC 1025233
Query 37379 CTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACT 37438
||| || ||| ||| | ||||| || || || | || | || | |
Sbjct 1025232 TTTTTCACCAATGTATTTAATATTGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGG 1025173
Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498
||| | | || || ||||||| | ||| |||| || || |||||||| ||
Sbjct 1025172 ATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGATATTTTCCATCAT 1025113
Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTT 37558
||||| || |||| | | ||||||| | || ||| || || |||| | |
Sbjct 1025112 GATCTGGAATTTGTAAACCAGCTTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTTC 1025053
Query 37559 AGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTAT 37618
| | ||||||||||| ||||| ||||| || ||||| || || | ||| | ||
Sbjct 1025052 AACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGAT 1024993
Query 37619 AAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 37675
||| ||||||||| | || || | |||| |||||||| || |||||| || ||
Sbjct 1024992 GAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAATCATCAAAATCTTTACTCAAGTC 1024933
Query 37676 AACTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATT 37735
|| ||| || | |||||||| ||| | | || || | |||||||| |||
Sbjct 1024932 AATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAGG 1024873
Query 37736 ATGTTGTATTGGAAA 37750
|| || |||||||||
Sbjct 1024872 ATATTTTATTGGAAA 1024858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592315689406000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |