Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 4e-35
seq21 93.3 5e-14
seq16 87.8 2e-12
>seq1
Length=2377843
Score = 163 bits (180), Expect = 4e-35
Identities = 425/640 (66%), Gaps = 26/640 (4%)
Strand=Plus/Minus
Query 172322 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTGCTTACTACaaaaaaaaTTGT 172381
||| ||| |||||||||| | || || | |||||| | ||||| || ||| ||
Sbjct 1090947 ACAATTAAGATTTGATTTATCAAATGATACATTTCCATTGTTAACTACCAAGAAA---GT 1090891
Query 172382 ATATACTAA---TATCCTCAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 172438
| | |||| |||| | | ||| | |||||| ||||| || ||||| ||| | ||
Sbjct 1090890 CTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGATCAACCGATGCTAA 1090831
Query 172439 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 172498
| |||| | | |||||||||| ||||| | | |||||| |||||||| ||||||||
Sbjct 1090830 AATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCTCGTGAGTTTTTAGA 1090771
Query 172499 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATG 172558
| | || || ||| | | ||||||||||| || ||| ||||||| || |||||
Sbjct 1090770 TAAGTTAGGATTGACTCATCGTCGTGAAGGTGATTTGGGACCAGTTTATGGTTTCCAATG 1090711
Query 172559 GAGACATGCAGGGGCTCAATATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGA 172618
|||||| || ||| |||||| || |||||| | ||||| || |||||||| ||
Sbjct 1090710 GAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTATACTGGACAAGGTTATGA 1090651
Query 172619 CCAATT--AAGTCAAACTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTA 172676
|| || ||| | | ||||| | ||| | ||||||| | |||||| || |
Sbjct 1090650 TCAGTTGCAAG--ATATCATTAAGAAATTAAAGTCCAACCCATATGATAGAAGAATAATC 1090593
Query 172677 ATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCAT-ACTTT 172735
|| | |||||| ||| | |||||||||||| | | ||||| || ||| ||||
Sbjct 1090592 ATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCTTTACCTCCATGTCATGTCTTT 1090533
Query 172736 AGCACAATTTTATGT--------CAGaaaa----aaaTCAATCTTAGATTGTCAGTTATA 172783
| ||||| ||||| ||||||| ||| | | ||| ||| || ||
Sbjct 1090532 TG-TCAATTCTATGTTAATTTCCCAGAAAACGCTAAACCTAAATTATCATGTTTATTGTA 1090474
Query 172784 TCAAAGATCAGCTGATTTAGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172843
||| ||||| |||| | || ||||| || |||| || |||| | ||| | || ||
Sbjct 1090473 TCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAACATTGCTTCCTATGCTTTGTT 1090414
Query 172844 AA-TACTTGTGTTAAGTAAATGGTGCAATTTAACTCCAGGAAAGTTTATTCATACTTTTG 172902
|| || || | |||| || | | || | |||||||||||| | |
Sbjct 1090413 AACTAAGATGATTGCTCATGTGGT-TGATATGGATTGTGGTGAATTTATTCATACTATGG 1090355
Query 172903 GAGATGTTCACGTGTATTCAAATCATGTTGAACCTTTAAA 172942
| |||| ||||||||||| ||||||| || |||| ||
Sbjct 1090354 GTGATGCTCACGTGTATTTGGATCATGTGGATGCTTTGAA 1090315
>seq21
Length=244291
Score = 93.3 bits (102), Expect = 5e-14
Identities = 170/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 194590 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 194649
||||| | || || | |||||| || | ||||| |||||| |||||||||||||
Sbjct 1925 ATTTTCTTTGGTCCTATTTATTATCAAAAATTGAAACATATGGTTTTGGATAAAATGCAT 1866
Query 194650 GCTAGAAGTCATGGGCAAGTAACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCAA 194709
|| ||| | || | | | || |||| ||||||||| | ||| | || |
Sbjct 1865 GCAAGAGCTAGAGGTCCAAGAGCTGTTTTAACAAGACAACCAACTGAAGGTAGATCAAGA 1806
Query 194710 GGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTACT 194769
| ||| ||||| ||||| || || ||||||| ||| ||| || | | | |||||||| ||
Sbjct 1805 GATGGTGGTTTGAGATTGGGTGAGATGGAAAGAGATTGTGTTATTGCCTATGGTGCTTCT 1746
Query 194770 CAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCACA 194829
|| || ||| |||||| | | | | ||| ||| | ||| | || |||||||| |
Sbjct 1745 CAGTTGTTATTGGAAAGATTAATGATTTCTTCCGATGCATTTGAGGTAGATGTTTGTAAC 1686
Query 194830 GAATGTGGT 194838
| ||||||
Sbjct 1685 AAGTGTGGT 1677
>seq16
Length=329187
Score = 87.8 bits (96), Expect = 2e-12
Identities = 257/388 (66%), Gaps = 20/388 (5%)
Strand=Plus/Plus
Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009
||||||||||||||||| ||||||||| ||| | || | |||| | ||||||||
Sbjct 113426 ATTAAGGTTGCTCAATTGGCTGGGTATGTAAGTGAAAACACTGGTTATCATCATGGTGAG 113485
Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT- 166068
||| || | | || || ||| ||| || ||| | ||||||||| | ||||||||
Sbjct 113486 CAATCATTGGTTCAGACCATCATTGGGTTGGCACAAAACTTTGTTGGTTCTAATAATATC 113545
Query 166069 AGCATTACTT-GAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 166127
| ||| ||| |||| ||||| ||||||| ||| | || ||||||||||
Sbjct 113546 AACAT--CTTAAAACCAAATGGTTCCTTTGGTAGTAGAGCCGCTGGTGGTAAAGATTTCT 113603
Query 166128 CTGCATCAAGATATATTTATACCAAACCACAT-AAAATATTAAAATATATATTTAGAGAA 166186
| || | |||||||||| || || || ||| || || || | ||||| | |
Sbjct 113604 CCGCTGCGAGATATATTTTCACAGAATTGAATGAAATTACTAGAA-AGATATTCAATCCA 113662
Query 166187 GAAGATGACCCTATTTTA-AATTATACTGTTGAGGGTGAAC---CTATTCA--------- 166233
||||| || ||| || |||||| | || | ||||| || || |
Sbjct 113663 TTGGATGATCC-ATTGTATAATTATGTTCAAGATGATGAACAAACTGTTGAACCAGAGTG 113721
Query 166234 TTTTATTCCAGTAATCCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGATG 166293
| | |||| || | ||| | |||||| | |||||| || |||||||| || || ||
Sbjct 113722 GTATCTTCCTGTTTTGCCAATGATTTTAGTCAATGGTGCTGAAGGTATTGGTACTGGTTG 113781
Query 166294 GTCATGTTTTATACCTCAATATAATCCT 166321
|||| | ||| ||| |||||||||
Sbjct 113782 GTCAACTAATATTCCTTCTTATAATCCT 113809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632488414082000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |