Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq5 152 8e-32
seq16 143 4e-29
>seq5
Length=745199
Score = 152 bits (168), Expect = 8e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| ||||| || ||||| ||||| | || || ||| | |
Sbjct 622775 TGCAAATTTTCGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAATCTTCTG 622716
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | || || ||| ||||| ||| ||||||||| |||||||| |||||||
Sbjct 622715 ACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAAC 622656
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || |||||||||||||| || |||||| || | || || || |
Sbjct 622655 AAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACAACA 622596
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||||||||| ||| | || || || || |||| ||||| |||
Sbjct 622595 TTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 622549
Score = 98.7 bits (108), Expect = 2e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 146138 TCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTT 146197
|||||| |||||||||||| | |||||||| |||||||||||||| || |||||| ||
Sbjct 622897 TCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTT 622838
Query 146198 AACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || || || ||||| ||||| ||| | || || || || |||| ||||| ||
Sbjct 622837 GTCTGACTACAACATTCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 622778
Query 146258 TA 146259
||
Sbjct 622777 TA 622776
>seq16
Length=329187
Score = 143 bits (158), Expect = 4e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || ||||| ||||| | || || ||| ||
Sbjct 297274 TGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCCG 297333
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | ||||| ||| |||||| ||| |||||||| |||||||| |||||||
Sbjct 297334 ACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAAC 297393
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||||||||| || ||| |||||| || | || || || |
Sbjct 297394 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACA 297453
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||| ||||| || | || || || || |||| ||||| |||
Sbjct 297454 TCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 297500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786164925938000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |