Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq5 152 8e-32 seq16 143 4e-29 >seq5 Length=745199 Score = 152 bits (168), Expect = 8e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| ||||| || ||||| ||||| | || || ||| | | Sbjct 622775 TGCAAATTTTCGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAATCTTCTG 622716 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || ||| ||||| ||| ||||||||| |||||||| ||||||| Sbjct 622715 ACACCATTGATAACGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAAC 622656 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || |||||||||||||| || |||||| || | || || || | Sbjct 622655 AAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACAACA 622596 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||||||||| ||| | || || || || |||| ||||| ||| Sbjct 622595 TTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGGT 622549 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146138 TCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTT 146197 |||||| |||||||||||| | |||||||| |||||||||||||| || |||||| || Sbjct 622897 TCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACTTT 622838 Query 146198 AACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||||| ||||| ||| | || || || || |||| ||||| || Sbjct 622837 GTCTGACTACAACATTCAAAAGGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 622778 Query 146258 TA 146259 || Sbjct 622777 TA 622776 >seq16 Length=329187 Score = 143 bits (158), Expect = 4e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || ||||| || ||||| ||||| | || || ||| || Sbjct 297274 TGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCCG 297333 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| |||||| ||| |||||||| |||||||| ||||||| Sbjct 297334 ACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAAC 297393 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | || ||||| ||||||||||| || ||| |||||| || | || || || | Sbjct 297394 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACA 297453 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||| ||||| || | || || || || |||| ||||| ||| Sbjct 297454 TCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 297500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786164925938000