Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 >seq1 Length=2377843 Score = 122 bits (134), Expect = 1e-22 Identities = 331/501 (66%), Gaps = 32/501 (6%) Strand=Plus/Minus Query 180392 ACAACaaaaaaaaTAGTTTATAAAAATATTCTTAAAGAATTATTATGGATAATGAAAGGT 180451 || || || ||| | ||| |||| ||| || | |||||||||||| | || || Sbjct 1090904 ACTACCAAGAAAGTCTTTTCTAAAGGTATCATTCATGAATTATTATGGTTTATTGCTGGA 1090845 Query 180452 TTAACAAATTCTAATTTGTTAAATGATATTGGTGTTAAAGTGTGGAATGATAATGGTTCG 180511 | ||| || |||| | |||| | | ||||||||| | ||| | | |||||| || Sbjct 1090844 TCAACCGATGCTAAAATTTTAACCAACAAAGGTGTTAAAATTTGGGAAGGTAATGGATCT 1090785 Query 180512 CGTAAGTTTTTAGATTCTTGTGGATT---TCATTTTCGAAAAGAAGGTGATTTAGGACCA 180568 ||| ||||||||||| | ||||| |||| ||| ||||||||||| |||||| Sbjct 1090784 CGTGAGTTTTTAGATAAGTTAGGATTGACTCATCGTCGT---GAAGGTGATTTGGGACCA 1090728 Query 180569 ATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGACTGTGATACCAACTAT 180628 ||||||| || ||||||||||| || ||| |||||| || |||||| | | ||| Sbjct 1090727 GTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAGATTGTGATGCTGATTAT 1090668 Query 180629 ATCGGGCAAGGTATAGACCAATTAAGCCAAGTTAT-----AGAAACTATAAAAAATAATC 180683 | || |||||| || || || |||| ||| |||| || ||| | | Sbjct 1090667 ACTGGACAAGGTTATGATCAGTT---GCAAGATATCATTAAGAA---ATTAAAGTCCAAC 1090614 Query 180684 CCGAATG-CCGAAGAATAATCATAGATAGTTGGAATGTATCACAATTACCAGATATGGCT 180742 || ||| ||||||||||||| | |||||| | || | || | |||||| Sbjct 1090613 CCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTGATAAAATGGCT 1090554 Query 180743 CTTCCACCATGTCA-CTGTTTGGTACAATTTTATGTT--------AGAAA----TAAAAT 180789 | || |||||||| | ||| || ||||| |||||| ||||| |||| Sbjct 1090553 TTACCTCCATGTCATGTCTTTTGT-CAATTCTATGTTAATTTCCCAGAAAACGCTAAACC 1090495 Query 180790 TTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAA 180849 | | ||| || ||||||||| |||||| ||| | || || || || || | || Sbjct 1090494 TAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAGTTCCTTTCAA 1090435 Query 180850 TATTGCTTTCTATTCATTTTT 180870 ||||||| |||| | || || Sbjct 1090434 CATTGCTTCCTATGCTTTGTT 1090414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655278771350000