Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_025447.1
Length=348532
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 3e-20
>seq1
Length=2377843
Score = 114 bits (126), Expect = 3e-20
Identities = 252/376 (67%), Gaps = 30/376 (8%)
Strand=Plus/Plus
Query 299749 CATTTATGTTTGTTGGACCATCTGGTACTGGTAAAACAGAAATTACCAAAGCATTAGCAG 299808
||||||||||| | || ||| | |||||||||||||| ||| | |||||| |||||||
Sbjct 2165550 CATTTATGTTTTTAGGTCCAACGGGTACTGGTAAAACTGAATTAACCAAATCATTAGCTA 2165609
Query 299809 ACGCA------ACTGGTGCGGA---ACTCATTCGCTTTGATATGTCAGAATTTTCTCAAG 299859
| | || | | | | | ||| | ||||||||||| |||||| ||
Sbjct 2165610 AATTTTTATTTAATGATAAGAATGCAGTTATTAGATTTGATATGTCTGAATTTCAAGAAA 2165669
Query 299860 AACATACTGTTTCTAAACTAATTGGTTCACCTCCAGGTTATGTTGGTCATGATTCTGGTA 299919
||||||| |||| | | |||||||||| |||||||||||||||||| ||||| | |
Sbjct 2165670 AACATACCATTTCAAGATTAATTGGTTCTCCTCCAGGTTATGTTGGTTATGAT----GAA 2165725
Query 299920 ACGGTTTACTGTTGGATAAAATTGAGCAGTT--------CCCTAATGCAGTACTGTTACT 299971
| || || || || | ||||||| || || | || | ||| |
Sbjct 2165726 -------AGTGGTGAATTAACTGAAGCAGTTAGAAGAAAACCATATTCTGTTGTTTTATT 2165778
Query 299972 TGATGAAATTGAAAAAGCAGATCGTAAAGTACTACTAA-CCTTCCTACAGGTTTTGGATG 300030
||||||| ||||||| || ||| | | || | | || || |||| || || ||||
Sbjct 2165779 TGATGAATTTGAAAAGGCTCATCCTGATTTA-TCCAAATTATTATTACAAGTATTAGATG 2165837
Query 300031 AAGGTCGTCTGACTGGTTCTCAAGGTAAAACTGTATATTTTAATAACGTAACTGTTATTA 300090
||||| | |||| |||||| ||||||| | |||||| || || | || |||
Sbjct 2165838 AAGGTTCATTAACTGATTCTCATGGTAAAAAAATTGATTTTAGAAATACAATTATTGTTA 2165897
Query 300091 TGACTACAAACCTTGG 300106
||||| |||| ||||
Sbjct 2165898 TGACTTCAAATATTGG 2165913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1115169056780350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |