Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 >seq1 Length=2377843 Score = 114 bits (126), Expect = 3e-20 Identities = 252/376 (67%), Gaps = 30/376 (8%) Strand=Plus/Plus Query 299749 CATTTATGTTTGTTGGACCATCTGGTACTGGTAAAACAGAAATTACCAAAGCATTAGCAG 299808 ||||||||||| | || ||| | |||||||||||||| ||| | |||||| ||||||| Sbjct 2165550 CATTTATGTTTTTAGGTCCAACGGGTACTGGTAAAACTGAATTAACCAAATCATTAGCTA 2165609 Query 299809 ACGCA------ACTGGTGCGGA---ACTCATTCGCTTTGATATGTCAGAATTTTCTCAAG 299859 | | || | | | | | ||| | ||||||||||| |||||| || Sbjct 2165610 AATTTTTATTTAATGATAAGAATGCAGTTATTAGATTTGATATGTCTGAATTTCAAGAAA 2165669 Query 299860 AACATACTGTTTCTAAACTAATTGGTTCACCTCCAGGTTATGTTGGTCATGATTCTGGTA 299919 ||||||| |||| | | |||||||||| |||||||||||||||||| ||||| | | Sbjct 2165670 AACATACCATTTCAAGATTAATTGGTTCTCCTCCAGGTTATGTTGGTTATGAT----GAA 2165725 Query 299920 ACGGTTTACTGTTGGATAAAATTGAGCAGTT--------CCCTAATGCAGTACTGTTACT 299971 | || || || || | ||||||| || || | || | ||| | Sbjct 2165726 -------AGTGGTGAATTAACTGAAGCAGTTAGAAGAAAACCATATTCTGTTGTTTTATT 2165778 Query 299972 TGATGAAATTGAAAAAGCAGATCGTAAAGTACTACTAA-CCTTCCTACAGGTTTTGGATG 300030 ||||||| ||||||| || ||| | | || | | || || |||| || || |||| Sbjct 2165779 TGATGAATTTGAAAAGGCTCATCCTGATTTA-TCCAAATTATTATTACAAGTATTAGATG 2165837 Query 300031 AAGGTCGTCTGACTGGTTCTCAAGGTAAAACTGTATATTTTAATAACGTAACTGTTATTA 300090 ||||| | |||| |||||| ||||||| | |||||| || || | || ||| Sbjct 2165838 AAGGTTCATTAACTGATTCTCATGGTAAAAAAATTGATTTTAGAAATACAATTATTGTTA 2165897 Query 300091 TGACTACAAACCTTGG 300106 ||||| |||| |||| Sbjct 2165898 TGACTTCAAATATTGG 2165913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115169056780350