Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq1 114 3e-20 >seq1 Length=2377843 Score = 114 bits (126), Expect = 3e-20 Identities = 252/376 (67%), Gaps = 30/376 (8%) Strand=Plus/Minus Query 331227 CCAAGGTTTGTAGTCATAATAACAGTTACGTTATTAAAATATACAGTTTTACCTTGAGAA 331286 |||| |||| |||||||| || | || || |||||| | ||||||| |||||| Sbjct 2165913 CCAATATTTGAAGTCATAACAATAATTGTATTTCTAAAATCAATTTTTTTACCATGAGAA 2165854 Query 331287 CCAGTCAGACGACCTTCATCCAAAACCTGTAGGAAGG-TTAGTAGTACTTTACGATCTGC 331345 |||| | ||||||||| || || |||| || || | | || | | ||| || Sbjct 2165853 TCAGTTAATGAACCTTCATCTAATACTTGTAATAATAATTTGGA-TAAATCAGGATGAGC 2165795 Query 331346 TTTTTCAATTTCATCAAGTAACAGTACTGCATTAGGG--------AACTGCTCAATTTTA 331397 ||||||| |||||||| ||| | || | || || ||||||| | || | Sbjct 2165794 CTTTTCAAATTCATCAAATAAAACAACAGAATATGGTTTTCTTCTAACTGCTTCAGTTAA 2165735 Query 331398 TCCAACAGTAAACCGTTACCAGAATCATGACCAACATAACCTGGAGGTGAACCAATTAGT 331457 | || || | | | ||||| |||||||||||||||||| |||||||||| | Sbjct 2165734 TTCACCACT-------TTC----ATCATAACCAACATAACCTGGAGGAGAACCAATTAAT 2165686 Query 331458 TTAGAAACAGTATGTTCTTGAGAAAATTCTGACATATCAAAGCGAATGAGT---TCCGCA 331514 | |||| ||||||| || |||||| ||||||||||| | ||| | | | | | Sbjct 2165685 CTTGAAATGGTATGTTTTTCTTGAAATTCAGACATATCAAATCTAATAACTGCATTCTTA 2165626 Query 331515 CCAGT------TGCGTCTGCTAATGCTTTGGTAATTTCTGTTTTACCAGTACCAGATGGT 331568 || | | ||||||| |||||| | ||| |||||||||||||| | ||| Sbjct 2165625 TCATTAAATAAAAATTTAGCTAATGATTTGGTTAATTCAGTTTTACCAGTACCCGTTGGA 2165566 Query 331569 CCAACAAACATAAATG 331584 || | ||||||||||| Sbjct 2165565 CCTAAAAACATAAATG 2165550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113828259357200