Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 2e-23
seq1 107 2e-18
>seq5
Length=745199
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || | ||| | ||| ||||| || || ||||| ||||||||||| |||||||| |
Sbjct 622550 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGAC 622609
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | ||||||| | |||||||| ||| |||| | | |||||||| || ||
Sbjct 622610 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGA 622669
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||| |||||||| ||| ||| ||| | | | || | ||||| | | ||| |||
Sbjct 622670 ATACCTTCTTTATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCGACT 622729
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|||| || |||| ||| || || | |||||| || || |||||||||
Sbjct 622730 TCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACGAAAATTTGCATA 622777
>seq1
Length=2377843
Score = 107 bits (118), Expect = 2e-18
Identities = 423/654 (65%), Gaps = 21/654 (3%)
Strand=Plus/Plus
Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606
||||| ||||||||||| ||||| | || || |||||||| || | || ||| | |
Sbjct 1847478 GATTGAGATTGATCAATGAAAGCAGCTCTATCAGCAGCCATATCAATGATATGTTTTTGT 1847537
Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCG-CAATCGA 130665
|| |||||| | |||||||| | | || | || | | || ||| | ||| |
Sbjct 1847538 GAAATTTCCCAAACAGTCTTGTACAAAGCCTTGATTTCATCTGGGATGTTTGGCAAACCT 1847597
Query 130666 TTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC--AAT-CC 130722
| || || ||| ||||||| ||||| ||| | | | | ||| | | ||| ||
Sbjct 1847598 TGGATCGA-ACCATTGTTGGAAATAAT---GTTACTCTTCATAGCATCATTCCAAATACC 1847653
Query 130723 AAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGAC 130782
| | || | ||| || | ||| | ||| | ||||| || |||||||||| ||
Sbjct 1847654 CAAATCAACCAAATCCTTCAACAAGTATGGATTGACAATTTGGAATTCACCAGCCAAAAC 1847713
Query 130783 GCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTG 130842
| |||| |||||||||| ||| | ||||| || |||| ||||| || || |||||
Sbjct 1847714 TCTTCTAGAGTAAATGTTGGAAGTGTAAGGTTCGAAACATTCATTGTTACCCAAGATTTG 1847773
Query 130843 TGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGT 130902
|| |||| || || ||||| || || || | || || | | ||| || | |
Sbjct 1847774 TGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAGGAGTTTCTCAAACCATGTTTGGC 1847833
Query 130903 GATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACAT 130962
|| ||| | ||||| |||||||||||||| || ||||| |||||||||
Sbjct 1847834 CATCTTTTGTTTCAAAGTATCCCAATCCCATAATTCAGTTGGTTT---TCTGTTCCACAA 1847890
Query 130963 ATCAAATTGTAGTATGCCTTTA----CTGGCGGGACTGGATTCGAACGATTCGTAGATTC 131018
|||||||||| || |||| | |||| | |||| | ||| ||| |||| |
Sbjct 1847891 GTCAAATTGTAATAAACCTTGAGAAGCTGGAGAACCTGGGT---AAC-TTTCATAGACAC 1847946
Query 131019 CTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAA 131078
|||| || ||| | || | || ||| | ||| | | ||||||||||| |
Sbjct 1847947 CTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAGCAGCATGGTAAATGGTTTCAAAGA 1848006
Query 131079 TTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAG 131138
|||| | ||||||| | | |||| | || | || ||| ||| | |||||||
Sbjct 1848007 TTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAAATGGCAATCTCAAAGACATAAAAG 1848066
Query 131139 CGTCTGCGAGACCCTGTA-TCCCAACGCCCACCGGTCTATGTTTTAAATTACAT 131191
| || || | ||| || | ||||| | | | ||||| ||| | | |||| ||
Sbjct 1848067 CATCAGCTAAACCTTGAACACCCAAAG-CAATTGGTCTGTGTCTCATATTAGAT 1848119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933623166800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |