Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 230 3e-55
seq21 120 4e-22
seq3 98.7 1e-15
>seq1
Length=2377843
Score = 230 bits (254), Expect = 3e-55
Identities = 855/1321 (65%), Gaps = 37/1321 (3%)
Strand=Plus/Plus
Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728
|||||||| || ||||| || | |||||| ||| ||||| | ||||| |||
Sbjct 1847685 TTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAGGT 1847744
Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788
|| || |||||||| |||||||||||||||| || || || ||||||||||| || | |
Sbjct 1847745 TCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAACC 1847804
Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG--T 110846
|| | ||| | | ||| | | || || || | | |||||| || |
Sbjct 1847805 AACAAGGAGTTTCTCAAACCATGTTTGGCCATCTTTTGTTTCAAAGTATCCCAATCCCAT 1847864
Query 110847 AGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906
| || || ||||||| |||| ||| |||||| || | | ||||| || || ||||
Sbjct 1847865 AATTCAG-TTGGTTTTCTGTTCC-ACAAGTCAAATTGTAATAAACCTTGAGAAGCTGGAG 1847922
Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966
|||| | |||||||| ||||| | |||| |||||| | || | |
Sbjct 1847923 AACCTGGGTAACTTTCATAGACACCTTCTTCAGCAGCTAATTCAATAGAAGATTCAACAG 1847982
Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026
|| || || |||||||||||||| || || | || | ||||| | |||||||
Sbjct 1847983 CAGCATGGTAAATGGTTTCAAAGATTTGAATGTTTAATTCTCTAGCTTCTTGAGAATCAA 1848042
Query 111027 ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTC 111086
||| | | | | ||||| |||| || | |||||||||||||||| |||| ||||
Sbjct 1848043 ATGGCAATCTCAAAGACATAAAAGCATCAGCTAAACCTTGAACACCCAAAGCAATTGGTC 1848102
Query 111087 TGTGTCGCATATTAGA-CTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTCAATGAC 111144
|||||| ||||||||| ||||| || ||| ||| || || | || | || || ||
Sbjct 1848103 TGTGTCTCATATTAGATCTTTC-AGC-TTCTGGAACTGGGTAGTAGTTACGATCGATAAC 1848160
Query 111145 TCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA---TAATCAAA 111201
|| ||| | || || |||| || || | |||||| | ||||||| | || |
Sbjct 1848161 TCTGTTCAAGTTACGAGTGACAACTTTAGTAACTTCATGCAATTTTTCAAAGTTATACCA 1848220
Query 111202 AGTGCGAGTCTCTTCATTG------ACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 111255
||| | | ||||| | ||| | ||| | || || || ||||| || ||
Sbjct 1848221 AGT---ATTGCTTTCATCGTGTTCAACAAAAGATGGCAATGCAATGGAAGCCAAGTTACA 1848277
Query 111256 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTT 111315
|||||| ||||| | | | || || | |||||| ||| ||||||||| ||
Sbjct 1848278 AACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATTT 1848337
Query 111316 AATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTA 111375
|| |||||||||||||||||| |||| |||| || ||||| || || | ||| |
Sbjct 1848338 GATGACACCCAAATTCTTTTGGTTAGTCTTGGTGTTACAAGCATCTTTATACAACATAAA 1848397
Query 111376 GGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGC--TGGT 111433
|| || || || || || || | | | ||||| | ||| | | ||| || |
Sbjct 1848398 TGGAGTACCAGTTTCGGTTTGGGCACTCAAGATAGCGTACCATAATTTTTGGGCTTTGAT 1848457
Query 111434 ACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493
|| | | | || |||| ||||| | || || | ||||||| || |||
Sbjct 1848458 GGTTTGTC--TACCACGGTTCTCCTTTTCGTATCTGGTATATAATTCTTCAAATTCATCA 1848515
Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCT 111553
|| | || || | |||||| || | | |||| |||| | || ||| | ||| |
Sbjct 1848516 CCGTAGACATCTGACAAACCTGGAGCTTCATTTGGAGAGAACAAAGTCCAGTCACCGTTT 1848575
Query 111554 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACA 111612
| ||||| | ||||||||| | ||||| ||||||| | || || | ||||| |
Sbjct 1848576 TGTTCAACTCTCTTCATGAACAAATCTGGGATCCACAAAGCTGGGAACAAGTCTCTGGCT 1848635
Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 111672
| || ||||| | ||| ||||| || | || | || || | |||||| |||
Sbjct 1848636 CTGA-TTTCTTCTTTACCGTGGTTCTTTCTAATATCGATAAAGTCAAAGATATCACTGTG 1848694
Query 111673 CCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACAT 111728
|||||| || | || | || | || || || | | ||| |||||| ||||
Sbjct 1848695 CCATGGTTCCAAGTATAAAGCAAAAGCACCTGGTCTCTTG-TTACCACCTTGATCAACAT 1848753
Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG 111788
| || || ||| ||| || || | | ||| ||||||||||| | || |||||| |
Sbjct 1848754 AACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCGTTGGAAGTACCATTAG 1848813
Query 111789 TCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAG 111848
| || ||| || | ||| | | | |||||||||| |||||||| ||||
Sbjct 1848814 TACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGCAAACCAATACCACCAG 1848873
Query 111849 CCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCT 111908
| | ||| || ||| ||||| | | ||| | || ||||| | || || || |
Sbjct 1848874 CACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAATACCTTCAATGGAATCAT 1848933
Query 111909 CCTTGTTGGCGATAAGGAAGCAAC-TG--GACATCTGCGGTCTTGGTGTACCAGCATTGA 111965
|||| | || ||| ||| ||| || ||||| || |||||||| ||||| |||||||
Sbjct 1848934 CCTTCATAGC---AAGCAAGAAACATGAAGACATTTGTGGTCTTGGGGTACCGGCATTGA 1848990
Query 111966 A 111966
|
Sbjct 1848991 A 1848991
>seq21
Length=244291
Score = 120 bits (132), Expect = 4e-22
Identities = 333/501 (66%), Gaps = 26/501 (5%)
Strand=Plus/Plus
Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773
|||| ||| || |||||||| ||||||||| || || ||||||| |||||| |||||
Sbjct 7456 TTTGATGTATAAGGTTCAAAACATTCATTAAATCCTAAAATTTGTGAGGTGGAAGCTGTA 7515
Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTG-ATGCGTTCCTTGAG 110832
||||||||||| | |||||| || | | |||| | ||| |||| ||| |||||
Sbjct 7516 GGCATTGGTGCAACCAAAAGGGAATTTCTTA-ACCCAAATTTTTGAATGCTTTCTTTGAG 7574
Query 110833 AACATCCCAGTCGTA---GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCAC 110889
|| ||||||||| || | || | | | |||||| ||||| || || |
Sbjct 7575 TTTATTCCAGTCGTACATCTTAGACGGAGTATGA---TTCCACATATCAAATTGTAGAAT 7631
Query 110890 CCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT---CAGCCAA 110946
|||| || || || || || | ||| |||||||| | || | ||| || ||
Sbjct 7632 ACCTTCAGATGCAGGTGATCCTTGAAAAGTTTCATATGGTCC---GTCTTGAATAGATAA 7688
Query 110947 TTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTC 111006
|||| || || || | || || || || |||||||| || || ||| | |
Sbjct 7689 TTCAACTGAAGCTTCAAGAGCCGCATGGTAGATTGTTTCAAATATCTGAATATTTAATTT 7748
Query 111007 CTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAAT-----AAATACATCCGCGAGA 111061
| | || | ||||| ||||||| ||||| | || | ||||| ||| || |
Sbjct 7749 CCTAGCAGCTTCTGATTCAAATG-GTAGC----CTAAGTTCGGCAAATAAATCTGCTAAC 7803
Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT-TTCGCGCAGTCTCAAC 111120
|||||||||||||| |||| || | || || |||| || | |||| || ||||||||
Sbjct 7804 CCTTGAACACCCAAGGCAATTGGACGGTTACGTTTATTTGAGTATTCG-GCTGTCTCAAC 7862
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
||||| || || || || ||| ||| | ||||| | | | ||| ||||
Sbjct 7863 AGGATATAATGTTACATCGATCACTTTGTTCAAGTTTTTAGCCAACACCTTGGTGACAGA 7922
Query 111181 ATGAAGTTTTTCATAATCAAA 111201
||| ||||| || |||||||
Sbjct 7923 ATGTAGTTTCTCGAAATCAAA 7943
>seq3
Length=1232947
Score = 98.7 bits (108), Expect = 1e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663
|||||| | ||||| ||||| || || | ||||| || ||||||||| ||||||
Sbjct 1215398 TATGGTAGAGTTGCTCCACGTTCTGGATTAGCTGTTAAACATGGTATTTCTACTGGTGCT 1215457
Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723
|||||||||||| | || ||| |||||||| ||||| ||| | || ||||| | ||
Sbjct 1215458 GGTGTTATTGATGCTGATTATCGTGGTGAAGTTAAAGTTGTTTTATTTAATCATAGTGAA 1215517
Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762
||||| ||||| | || |||| ||| | || || |||
Sbjct 1215518 AAAGATTTTGAAATTAAACAAGGTGATAGAATTGCTCAA 1215556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030822440000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |