Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 277 2e-69
seq21 136 5e-27
seq3 84.2 3e-11
>seq1
Length=2377843
Score = 277 bits (306), Expect = 2e-69
Identities = 1174/1816 (65%), Gaps = 59/1816 (3%)
Strand=Plus/Minus
Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGA 104213
|| |||||| |||||||| | || |||| | ||| | ||| || | ||| |||
Sbjct 1849174 TACTTTGGTTTCAAAACCATGGA-AAGATCATATTTGTTACGTATCAACGGTAAAGTTGC 1849116
Query 104214 TGGAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACAT 104271
|| ||| ||||| |||| | | ||| | || || || |||||||| || |||| ||
Sbjct 1849115 TG-AAAGACCACA--ACATTTAATTATGAGAGTTGCTATTGGTATTCACGGTAAAGATAT 1849059
Query 104272 TGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACAC 104330
| || | || || || | |||||| ||| | ||| |||| |||| | |
Sbjct 1849058 TCCAAGAGTTATTGAAACTTATAATTTGATGTCACAAAGATAT-TTCACACACGGTTCCC 1849000
Query 104331 CAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTC--CA-GTTGCTTCCTTATCG 104387
|| | |||||||| ||||| |||||||| |||||||| || ||| ||| ||| |
Sbjct 1848999 CATGTTTGTTCAATGCCGGTACCCCAAGACCACAAATGTCTTCATGTTTCTTGCTT---G 1848943
Query 104388 CCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCT 104447
| | ||||| || || || | ||||| || | ||| | | ||||| ||| |
Sbjct 1848942 CTATGAAGGATGATTCCATTGAAGGTATTTACGATACTTTGAAATCATGTGCTTTAATTT 1848883
Query 104448 CAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA 104507
| ||| | ||||| |||||||| |||||||||| | | | ||| | || |
Sbjct 1848882 CCAAGAGTGCTGGTGGTATTGGTTTGCACATCCACAACATTCGTTCCACTGGTGCTTACA 1848823
Query 104508 TTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCA 104567
|| || || |||||| || | ||||||||||| ||| | | || || ||| ||
Sbjct 1848822 TTGCTGGTACTAATGGTACTTCCAACGGTATTATTCCTATGGTCAGAGTTTTCAACAACA 1848763
Query 104568 CAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTT 104623
| || || ||||| |||||| ||| | | || || || | || | || |
Sbjct 1848762 CTGCTCGTTATGTTGATCAAGGTGGTAA-CAAGAGACCAGGTGCTTTTGCTTTATACTTG 1848704
Query 104624 GAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAG 104683
|| ||||||||| |||||| | || || | || | | ||||| ||| | ||
Sbjct 1848703 GAACCATGGCACAGTGATATCTTTGACTTTATCGATATTAGAAAGAACCACGGTAAAGAA 1848644
Query 104684 GAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 104742
|| | | ||| | || | ||| | ||| | ||||| |||||| | |||||||||||
Sbjct 1848643 GAAAT-CAGAGCCAGAGACTTGTTCCCAGCTTTGTGGATCCCAGATTTGTTCATGAAGAG 1848585
Query 104743 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA 104802
|||||| | | || | ||| || | || | |||| | | || || ||| | || ||
Sbjct 1848584 AGTTGAACAAAACGGTGACTGGACTTTGTTCTCTCCAAATGAAGCTCCAGGTTTGTCAGA 1848525
Query 104803 TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGA--AGAAGGTCGGGCG 104860
|| | ||||| || ||||||| | || || | ||||| | |||| || |
Sbjct 1848524 TGTCTACGGTGATGAATTTGAAGAATTATATACCAGATACGAAAAGGAGAACCGTGGTAG 1848465
Query 104861 ACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGT-CTCAAACCGAGAC 104919
|| || | ||| | | ||| | ||||| || ||| | |||||||| ||
Sbjct 1848464 ACAA--ACCATCAAAGCCCAAAAATTATGGTACGCTAT-CTTGAGTGCCCAAACCGAAAC 1848408
Query 104920 TGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTT 104979
|||||| |||| ||| | || ||||| || |||||| |||| ||| |||||||||||
Sbjct 1848407 TGGTACTCCATTTATGTTGTATAAAGATGCTTGTAACACCAAGACTAACCAAAAGAATTT 1848348
Query 104980 GGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA 105039
|||||| ||||| |||||| | ||| ||||| | |||| | | | ||||||
Sbjct 1848347 GGGTGTCATCAAATCTTCCAACTTGTGTTGTGAAATTGTTGAATATTCTGCTCCAGATGA 1848288
Query 105040 GACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAA 105098
||||| |||||| | || || || || | || | ||| || | || || |
Sbjct 1848287 AGTTGCTGTTTGTAACTTGGCTTCCATTGCATTGCCATCTTTTGTTGAACACGATGAAAG 1848228
Query 105099 AGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCT 105153
| | ||| | | ||||||| | || |||||||| ||| |||||| ||| |
Sbjct 1848227 CAATACTTGGTATAACTTTGAAAAATTGCATGAAGTTACTAAAGTTGTCACTCGTAACTT 1848168
Query 105154 AAACAGAGTTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGA 105212
||||||||||| ||| | || | ||||| ||| ||| ||| | |||||||||||
Sbjct 1848167 GAACAGAGTTATCGATCGTAACTACTACCCAGTTCCAGAA-GCTGAAAGATCTAATATGA 1848109
Query 105213 GACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTG---T 105268
||||| | ||||||| | | |||||||| ||| | || |||| || || |||||| |
Sbjct 1848108 GACACAGACCAATTGCTTTGGGTGTTCAAGGTTTAGCTGATGCTTTTATGTCTTTGAGAT 1848049
Query 105269 CGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATG 105328
|| |||||||||| | ||||| | ||| | || | || ||||| |||||
Sbjct 1848048 TGC----CATTTGATTCTCAAGAAGCTAGAGAATTAAACATTCAAATCTTTGAAACCATT 1847993
Query 105329 TATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACC 105388
|| || || ||| |||| | | || || || | | || ||| |||||||
Sbjct 1847992 TACCATGCTGCTGTTGAATCTTCTATTGAATTAGCTGCTGAAGAAGGTGTCTATGAAAGT 1847933
Query 105389 TTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACC 105448
| |||||||||||||| ||||| | | |||||||| ||| |||| | |||
Sbjct 1847932 TACCCAGGTTCTCCAGCTTCTCAAGGTTTATTACAATTTGACTTGT-GGAACAGAAAACC 1847874
Query 105449 AAGCTTCACTA--CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTA 105506
|| || | || || ||||| || | || || || | | ||| | | |
Sbjct 1847873 AA-CTGAATTATGGGATTGGGATACTTTGAAACAAAAGATGGCCAAACATGGTTTGAGAA 1847815
Query 105507 ACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATG 105566
|| | | | |||||||||||||| || || || |||||||||||||||| ||||
Sbjct 1847814 ACTCCTTGTTGGTTGCTCCAATGCCAACTGCTTCTACTTCACAAATCTTGGGTAACAATG 1847755
Query 105567 AATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTT 105625
|||| || ||||| ||||| | ||||| || ||| |||||| | || || || ||
Sbjct 1847754 AATGTTTCGAACCTTACACTTCCAACATTTACTCT-AGAAGAGTTTTGGCTGGTGAATTC 1847696
Query 105626 GTGATTGTCAA--CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGG 105683
|||||||| || | | | || | || | || | ||| | ||| | |
Sbjct 1847695 CAAATTGTCAATCCATACTTGT--TGAAGGATTTGGTTGATTTGGGTATTTGGAATGATG 1847638
Query 105684 ATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAA 105743
||||||| | ||| | |||||| || ||| | | | || |||
Sbjct 1847637 CTATGAAGAGTAACATTATTTCCAACAATGGTTCGATCCAAGGTTTGCCAAACATCCCAG 1847578
Query 105744 ATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGA 105801
||||||| ||| |||||| || |||||||||| ||| | || || |||||||
Sbjct 1847577 ATGAAATCAAGGCTTTGTACAAGACTGTTTGGGAAATTTCACAA--AAACATATCATTGA 1847520
Query 105802 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGA 105861
||||| || ||| | | | |||||||||||| |||| | ||||| | ||| |
Sbjct 1847519 TATGGCTGCTGATAGAGCTGCTTTCATTGATCAATCTCAATCTTTGAATATTCACATTAA 1847460
Query 105862 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAA 105921
| |||||| ||| || | | |||||| | || |||||||||||||| | ||
Sbjct 1847459 AGATCCAACTATGGGTAAATTGACAAGTATGCATTTCTATGGTTGGAAGAAGGGTTTGAA 1847400
Query 105922 AACGGGGATGTATTAC 105937
|| || ||||| |||
Sbjct 1847399 GACTGGTATGTACTAC 1847384
>seq21
Length=244291
Score = 136 bits (150), Expect = 5e-27
Identities = 633/985 (64%), Gaps = 45/985 (5%)
Strand=Plus/Minus
Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952
||| ||| | | || ||||| || || ||| ||||| |||||||| ||||| |||||
Sbjct 8163 AGCAATTTTAGAATCACAAACTGAAACCGGTGGCCCATATATGCTTTATAAAGATGCCTG 8104
Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012
||| |||| ||||| || || | ||| |||||| || ||| | || ||
Sbjct 8103 TAATGAAAAATCAAATCAGAAAAACCTTGGTACAATCAAGTCGTCAAATTTGTGCTGTGA 8044
Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072
||| | |||| | || ||| || || ||||||||||| |||| || | || |
Sbjct 8043 AATTGTTGAATATTCATCACCAGAAGAAACAGCTGTGTGTAATCTCGGGTCCCTTGCATT 7984
Query 105073 CCCCAAGTATGTGGATCCA---GA-GACAAAGACAT-----TTGATTATGAAAAACTCCA 105123
|| | |||| || | || || || ||| || |||||| || ||||| ||
Sbjct 7983 ACCGACGTATTTGAAAACATCCGATGATGAAGTAATAGAGTTTGATTTCGAGAAACTACA 7924
Query 105124 CGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183
|| || || | | |||||| | |||| ||| || ||| || || || ||
Sbjct 7923 TTCTGTCACCAAGGTGTTGGCTAAAAACTTGAACAAAGTGATCGATGTAACATTATATCC 7864
Query 105184 CGTTGAGACTGCTCGTAAA-TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242
|||||||| || || | | || |||| | |||||||||||| | |||||||| |
Sbjct 7863 TGTTGAGACAGC-CGAATACTCAAATAAACGTAACCGTCCAATTGCCTTGGGTGTTCAAG 7805
Query 105243 GTCTCGCGGATGTATT---CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGG 105299
| | || ||| |||| | ||| | || || ||||||| || || | || | |
Sbjct 7804 GGTTAGCAGATTTATTTGCCGAACTTAG--GCTAC-CATTTGAATCAGAAGCTGCTAGGA 7748
Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG--AGTTCAGA 105357
|| | ||| | |||||||| || || || || || |||||||| || |||| ||
Sbjct 7747 AATTAAATATTCAGATATTTGAAACAATCTACCATGCGGCTCTTGAAGCTTCAGTT--GA 7690
Query 105358 GTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGT 105417
|| | || || ||||||||||| ||| | || || || || || |||| |
Sbjct 7689 ATTATCTATTCAAGACGGACCATATGAAACTTTTCAAGGATCACCTGCATCTGAAGGTAT 7630
Query 105418 GCTTCAATTTGATATGTGG---GAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCT 105474
|| ||||||||||||||| | | | | ||| | ||||||||| | ||
Sbjct 7629 TCTACAATTTGATATGTGGAATCATACTCCGTCTAAGAT---GTACGACTGGAATAAACT 7573
Query 105475 CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAA 105533
||| ||| ||| |||| | |||| | | || || | | || |||||||| |
Sbjct 7572 CAAAGAAAGCATTCAAAAATTTGGGT-TAAGAAATTCCCTTTTGGTTGCACCAATGCCTA 7514
Query 105534 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACA 105593
|||| |||||| ||||||| || || ||||||||| |||||||| || || | ||
Sbjct 7513 CAGCTTCCACCTCACAAATTTTAGGATTTAATGAATGTTTTGAACCTTATACATCAAATT 7454
Query 105594 TCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATG 105653
| ||| | || | | |||||||| | | || || ||| || | | | |
Sbjct 7453 TATATAACCGTAGGGTGTTGTCAGGAGAGTTCCAGGTGGTTAATAAGTATTTAATTAAAG 7394
Query 105654 ACCTCAAAGAGATTGGTCTCTGG---TC--CAAGGATATGAAGGATCTCATGGTGAAAGC 105708
|| | | || | ||| | ||| || ||| || | || | ||||| || ||
Sbjct 7393 ACTTGATGGATTTGGGTATTTGGAATTCAGCAATGAGA--AATAAAATCATGATGGAA-- 7338
Query 105709 GGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCAC 105768
||| |||||||||||||| | ||||| || || || || | ||||| ||
Sbjct 7337 -AATGGCTCCATTCAAAATATACAGAGCATTCCCAAAGACATCAAAGAATTGTATAAAAC 7279
Query 105769 AGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 105825
||| |||||||| | | | ||| | | ||||| ||||| || ||| | ||| ||
Sbjct 7278 AGTGTGGGAAATTTCCCAAA--AAGTA-ATAATTGATATGGCAGCTGATAGAGGTAAATT 7222
Query 105826 CATTGATCAAAGTCAAAGTATGAAT 105850
||||||||| ||||||||||||
Sbjct 7221 TATTGATCAACTGCAAAGTATGAAT 7197
>seq3
Length=1232947
Score = 84.2 bits (92), Expect = 3e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 154106 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTATCCAAGTTGGTGCG 154165
||||| | ||||| ||||| ||||| | ||||| ||||||||||| ||||||
Sbjct 1215398 TATGGTAGAGTTGCTCCACGTTCTGGATTAGCTGTTAAACATGGTATTTCTACTGGTGCT 1215457
Query 154166 GGTGTTGTTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGAC 154225
|||||| ||||| | || || |||||||| ||||| ||| | || ||||| | ||
Sbjct 1215458 GGTGTTATTGATGCTGATTATCGTGGTGAAGTTAAAGTTGTTTTATTTAATCATAGTGAA 1215517
Query 154226 AAAGACTTTGA 154236
||||| |||||
Sbjct 1215518 AAAGATTTTGA 1215528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259706386000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |