Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 5e-16 >seq16 Length=329187 Score = 98.7 bits (108), Expect = 5e-16 Identities = 343/524 (65%), Gaps = 15/524 (3%) Strand=Plus/Minus Query 64862 GGATTATAACACATAATGTCAGT--ACTAAATCCTGTGCCAATACCCTTTGAGCCATTTA 64919 ||||||||| | ||| | ||| || || || || |||||||| | | ||||| | Sbjct 113808 GGATTATAAGAAGGAATATTAGTTGACCAA--CCAGTACCAATACCTTCAGCACCATTGA 113751 Query 64920 TTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCAT 64979 ||||||||| || | || || ||| | || |||||| | | ||||||| | Sbjct 113750 CTAAAATCATTGGCAAAACAGGAAGATACCACTCTGGTTCAACAGTTTGTTCATCATCTT 113691 Query 64980 CCAAATACTTCAA-AATGGCATCATCCTCTT--TTGGAAATATAGAACGAGTTATTTTAT 65036 | ||| || | ||||| ||||||| | ||| ||||| | ||| |||| || Sbjct 113690 GAACATAATTATACAATGG-ATCATCCAATGGATTG--AATATCTTTCTAGTAATTTCAT 113634 Query 65037 TCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCAGTT-CG--TCGTGTTC 65093 |||||| || |||||||||| | | | | |||| ||| || || | | Sbjct 113633 TCAATTCTGTGAAAATATATCTCGCAGCGGAGAAATCTTTACCACCAGCGGCTCTACTAC 113574 Query 65094 CAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCA 65153 |||| ||||||||| |||| | || ||||| || ||||||| ||| || || |||| Sbjct 113573 CAAAGGAACCATTTGGTTTTAAGATGTTGATATTATTAGAACCAACAAAGTTTTGTGCCA 113514 Query 65154 TTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAG 65212 || || || | ||| | | | ||| |||| |||||||| || | | |||| Sbjct 113513 ACCCAATGATGGTCTGAACCAATGATTGCT-CACCATGATGATAACCAGTGTTTTCACTT 113455 Query 65213 ACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAA 65272 ||||| ||| ||||||||||| || ||||| || |||| || || || | | | Sbjct 113454 ACATACCCAGCCAATTGAGCAACCTTAATTTCACTTTTTAATTTTTTCTTGATACAACCA 113395 Query 65273 TACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCA 65332 ||||| | ||| | | || |||||| ||||| | || |||||| |||| | Sbjct 113394 TACAAAACTTTTCTTTGACCTGGTTTCAAACCATCAAGTACTGAAGGAATAGATCTGATA 113335 Query 65333 CAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTC 65376 |||| | | ||||| || ||||||||||| ||||| || Sbjct 113334 TTATCAGACATGGAGAATAAAATCAATTCTTTGTTGATAAAATC 113291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679569147500