Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq16 98.7 5e-16
>seq16
Length=329187
Score = 98.7 bits (108), Expect = 5e-16
Identities = 343/524 (65%), Gaps = 15/524 (3%)
Strand=Plus/Minus
Query 64862 GGATTATAACACATAATGTCAGT--ACTAAATCCTGTGCCAATACCCTTTGAGCCATTTA 64919
||||||||| | ||| | ||| || || || || |||||||| | | ||||| |
Sbjct 113808 GGATTATAAGAAGGAATATTAGTTGACCAA--CCAGTACCAATACCTTCAGCACCATTGA 113751
Query 64920 TTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCAT 64979
||||||||| || | || || ||| | || |||||| | | ||||||| |
Sbjct 113750 CTAAAATCATTGGCAAAACAGGAAGATACCACTCTGGTTCAACAGTTTGTTCATCATCTT 113691
Query 64980 CCAAATACTTCAA-AATGGCATCATCCTCTT--TTGGAAATATAGAACGAGTTATTTTAT 65036
| ||| || | ||||| ||||||| | ||| ||||| | ||| |||| ||
Sbjct 113690 GAACATAATTATACAATGG-ATCATCCAATGGATTG--AATATCTTTCTAGTAATTTCAT 113634
Query 65037 TCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCAGTT-CG--TCGTGTTC 65093
|||||| || |||||||||| | | | | |||| ||| || || | |
Sbjct 113633 TCAATTCTGTGAAAATATATCTCGCAGCGGAGAAATCTTTACCACCAGCGGCTCTACTAC 113574
Query 65094 CAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCA 65153
|||| ||||||||| |||| | || ||||| || ||||||| ||| || || ||||
Sbjct 113573 CAAAGGAACCATTTGGTTTTAAGATGTTGATATTATTAGAACCAACAAAGTTTTGTGCCA 113514
Query 65154 TTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAG 65212
|| || || | ||| | | | ||| |||| |||||||| || | | ||||
Sbjct 113513 ACCCAATGATGGTCTGAACCAATGATTGCT-CACCATGATGATAACCAGTGTTTTCACTT 113455
Query 65213 ACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAA 65272
||||| ||| ||||||||||| || ||||| || |||| || || || | | |
Sbjct 113454 ACATACCCAGCCAATTGAGCAACCTTAATTTCACTTTTTAATTTTTTCTTGATACAACCA 113395
Query 65273 TACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCA 65332
||||| | ||| | | || |||||| ||||| | || |||||| |||| |
Sbjct 113394 TACAAAACTTTTCTTTGACCTGGTTTCAAACCATCAAGTACTGAAGGAATAGATCTGATA 113335
Query 65333 CAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATTC 65376
|||| | | ||||| || ||||||||||| ||||| ||
Sbjct 113334 TTATCAGACATGGAGAATAAAATCAATTCTTTGTTGATAAAATC 113291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679569147500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |