Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq16 105 8e-18
>seq1
Length=2377843
Score = 127 bits (140), Expect = 2e-24
Identities = 245/359 (68%), Gaps = 2/359 (1%)
Strand=Plus/Plus
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
||||| || | || ||||| ||||| ||| || || | | |||||| || |||||
Sbjct 1848738 CCACCTTGATCAACATAACGAGCAGTGTTGTTGAAAACTCTGACCATAGGAATAATACCG 1848797
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGA 81497
| || ||| || ||||| | || | || ||| || | ||| ||| ||
Sbjct 1848798 TTGGAAGTACCATTAGTACCAGCAATGTAAGCACCAGTGGAACGAATGTTGTGGATGTGC 1848857
Query 81498 AAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAAT 81557
|| ||| || ||||| | | ||| ||||| |||||| |||| || || |||||
Sbjct 1848858 AA-ACCAATACCACCAGCACTCTTGGAAATTAAAGCACATGATTTCAAAGTATCGTAAAT 1848916
Query 81558 TCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTT 81617
|| || ||| ||| | ||||| ||||||||||||| ||||| || || |||
Sbjct 1848917 ACCTTCAATGGAATCATCCTTCATAGCAAGCAAGAAACATGAAGACATTTGTGGTCTTGG 1848976
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| ||||||||||||| ||||| |||| ||||||| | | |||||||| |
Sbjct 1848977 GGTACCGGCATTGAACAAACATGGGGAACCGTGTGTGAAATATCTTTGTGACATCAAATT 1849036
Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736
||| ||||| | || | ||||||||| | |||||||||||| ||||| || | |||||
Sbjct 1849037 ATAAGTTTCAATAACTCTTGGAATATCTTTACCGTGAATACCAATAGCAACTCTCATAA 1849095
>seq16
Length=329187
Score = 105 bits (116), Expect = 8e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | || || || |||||||| | || || || ||
Sbjct 297273 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCCTCC 297332
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | || ||||||| || ||||| || || ||||| ||||| ||
Sbjct 297333 GACACCATTGACAATGTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAGATCAA 297392
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 297393 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 297452
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||| || | || | ||||||
Sbjct 297453 ATCCAAAAGGAATCTACCTTGCACTTGGTCTTG 297485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309330668000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |