Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 5e-14 >seq1 Length=2377843 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/182 (72%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 139418 TCAAT-TCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAA 139476 ||||| ||||| || ||||| |||||||||||||| | || ||||||||||| || ||| Sbjct 1590944 TCAATATCTGGATCATTAATCAAACCTTTCCAACCAATGGTAGTTCTTGGTTTTTCTAAA 1590885 Query 139477 TAAACACGCATAACCAAAAGAAGATTTGGAAATTGTTTTT-----GTACTTCGGCTAAAC 139531 ||| | | ||| || || || | || | |||| ||| | ||| ||| | Sbjct 1590884 TAAGCTCTCATGAC--AATTAATAATTCGCCCTTGTGTTTTTCAGATGCTTTATATAATC 1590827 Query 139532 GTTCGCCGTATTCGAGAGCAGCTTTAGGGTCATGAATTGAACAAGGGCCTACAACAATAA 139591 ||| | || || | |||||||||||| |||||||| ||||| || || | ||||||| Sbjct 1590826 TTTCACAATAATCTAAAGCAGCTTTAGGATCATGAATAGAACATGGACCAATGACAATAA 1590767 Query 139592 TT 139593 || Sbjct 1590766 TT 1590765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568328534382000