Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq16 111 1e-19
seq5 105 5e-18
>seq16
Length=329187
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || || || | ||||| ||| |||||| | || |||||| |
Sbjct 297270 AAGATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACTATTACCTTGGAAGTCGAATCC 297329
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||||| || ||||| |||||| ||||| |||||||||||| |||| |
Sbjct 297330 TCCGACACCATTGACAAT--GTCAAATCTAAAATCCAAGACAAAGAAGGTATTCCACCAG 297387
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || ||||||||||| || | | | ||||| || |
Sbjct 297388 ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 297447
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| || || ||||| ||||| ||| | ||| | || ||
Sbjct 297448 ACAACATCCAAAAGGAATCTACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 297499
>seq5
Length=745199
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || |||||| | ||||| ||| |||||| | || |||||| |
Sbjct 622776 ATGCAAATTTTCGTTAAAACTTTAACTGGTAAAACTATTACCTTAGAAGTCGAATCTTCT 622717
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || | || |||||| ||||| || ||||||||| |||| || |
Sbjct 622716 GACACCATTGATAA--CGTCAAATCCAAAATCCAAGATAAAGAAGGTATTCCACCAGATC 622659
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || ||||| || || |||||||| || |||| | | |||||| || ||||
Sbjct 622658 AACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTGTCTGACTACA 622599
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| |||||||| |||||||| ||||| ||| | ||| | || ||
Sbjct 622598 ACATTCAAAAAGAATCTACTTTGCACTTGGTCTTGAGATTGAGAGGTGG 622550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355861749439050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |