Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq16 143 6e-29
seq5 141 2e-28
seq3 86.0 1e-11
>seq16
Length=329187
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | || ||||| ||||||| ||||| || | ||||||||| ||
Sbjct 297488 TCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 297429
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || |||||| || || ||||||||||| ||
Sbjct 297428 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 297369
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| || || ||| || |||||||| |||| ||| || || || || ||
Sbjct 297368 GTCTTGGATTTTAGATTTGACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAAT 297309
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| || || || || || || | ||| | |||||| ||
Sbjct 297308 AGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATCTT 297270
>seq5
Length=745199
Score = 141 bits (156), Expect = 2e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||| ||||||||||| | ||||| || | ||| ||||| ||
Sbjct 622561 TCTCAAGACCAAGTGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 622620
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| || || |||||||| || | || |||||| || || ||||||||||| ||
Sbjct 622621 GTCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 622680
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||| || || || || |||||||| || | ||| || ||||| || ||
Sbjct 622681 ATCTTGGATTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCGACTTCTAAGGTAAT 622740
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || |||||||| | ||| | ||||||
Sbjct 622741 AGTTTTACCAGTTAAAGTTTTAACGAAAATTTGCAT 622776
>seq3
Length=1232947
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || ||||||||||| ||||||||
Sbjct 614269 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCAGAGACATCACC 614210
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | || || || || || | || ||| ||||
Sbjct 614209 ACCTTGGGTTTCAATGACTGGCAAAGCGGTCAAAGAACCAGCACC 614165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528908104100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |