Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq16 104 5e-17
seq5 102 2e-16
>seq16
Length=329187
Score = 104 bits (114), Expect = 5e-17
Identities = 143/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
||||| || |||||||||||||| || | |||||||| |||||||| | ||| ||
Sbjct 297469 GTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCA 297410
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| | || || || || | | || ||||| || ||||| ||||| ||||
Sbjct 297409 GCAAAGATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTAGATTTG 297350
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | | |||| || || ||||| | ||||||||||| || || | |||
Sbjct 297349 ACATTGTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTC 297290
Query 152088 TTCACGAAGACCTGCATTTT 152107
|| ||||| | ||||| ||
Sbjct 297289 TTGACGAAAATTTGCATCTT 297270
>seq5
Length=745199
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | |||||| |||||||| |||||||| || | || ||||| || |||||||
Sbjct 622570 CAAG-TGCAAAGTAGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTA 622628
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
||| || ||||| || | || || || || | | || ||||| || ||||| |
Sbjct 622629 ATTGTTTACCAGCGAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGA 622688
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| |||||| | || | | |||| ||| || ||||| | ||||||||||| |
Sbjct 622689 TTTTGGATTTGACGTTATCAATGGTGTCAGAAGATTCGACTTCTAAGGTAATAGTTTTAC 622748
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||| || ||||| | |||||
Sbjct 622749 CAGTTAAAGTTTTAACGAAAATTTGCAT 622776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818582500650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |