Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 5e-30
seq16 140 7e-28
seq22 89.7 1e-12
>seq5
Length=745199
Score = 147 bits (162), Expect = 5e-30
Identities = 150/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||||||||| ||||||||||||| |||| || | || || |||| |||||| || || |
Sbjct 622585 TTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTACCGTCTTCTAATTGTTTACCAGCGA 622643
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| ||||| | |||||| || |||||||| || || |||||||| || | ||| |||
Sbjct 622644 AAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTGGATTTGACGT 622703
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
|||| || ||||| |||| ||||||||| | || || || ||||| || ||||| ||||
Sbjct 622704 TATCAATGGTGTCAGAAGATTCGACTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAA 622763
Query 283087 CGAATATCTGCAT 283099
|||| || |||||
Sbjct 622764 CGAAAATTTGCAT 622776
>seq16
Length=329187
Score = 140 bits (154), Expect = 7e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | ||||| || | |||||| || |||||
Sbjct 297464 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAA 297405
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | |||||| || |||||||| || ||||||||||| || | ||| || |
Sbjct 297404 GATCAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTAGATTTGACATT 297345
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| || | ||||||||| | || || || ||||| || || ||||| ||
Sbjct 297344 GTCAATGGTGTCGGAGGATTCGACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGAC 297285
Query 283088 GAATATCTGCATTTT 283102
||| || ||||| ||
Sbjct 297284 GAAAATTTGCATCTT 297270
>seq22
Length=238992
Score = 89.7 bits (98), Expect = 1e-12
Identities = 122/169 (72%), Gaps = 6/169 (4%)
Strand=Plus/Minus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| ||||| | |||||||| |||| || ||||||| || || || || |||
Sbjct 186715 GTTGGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATCAAGGTAGATTTACCGGCA 186656
Query 317086 CCATTGGGGCCGCAAAGACCATACCGA---TTTCCCTTCTTCAGATTAAAACGGGTGTTG 317142
||||| || || || | ||| || | |||| |||||| | || |||| |||
Sbjct 186655 CCATTTGGACCACACAAACCGTATCTTCTGTTTC---TCTTCAATCTGAATTGGGTCTTG 186599
Query 317143 TTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACA 317191
|||| | |||||| ||||||| |||| ||||||||||| | |||||
Sbjct 186598 TTCAACAAGATCTTAGCACCATAAGCCAAGGAGAACTCACAGTTACACA 186550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737188298100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |