Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1 331 1e-85
>seq1
Length=2377843
Score = 331 bits (366), Expect = 1e-85
Identities = 607/888 (68%), Gaps = 20/888 (2%)
Strand=Plus/Plus
Query 23158 TTTTAAAAATCTTCATCTAAAGTGAA--------TTTCACTG-CTTTATCACTATTCATA 23208
||||| ||||||||||| |||||||| |||| ||| ||| | | || ||||
Sbjct 1803856 TTTTAGAAATCTTCATCAAAAGTGAAAGCACCGGTTTCTCTGTCTTCAGCTTTAGACATA 1803915
Query 23209 ACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAAT 23268
||||| |||||| || || ||| | |||||||||| || || ||||| | ||
Sbjct 1803916 ACACCAGCTTTTTGGTAATCAGAAACTCTCTTTTCGAAAAAGTTGGTTTTACCAGCCAAG 1803975
Query 23269 GATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATA-- 23326
|| ||||||||||| ||||| ||||| |||| | ||| || || || | || ||
Sbjct 1803976 GAAATATTTTCCATGAAATCGAATGGGTTAGTAACATTGTAAAC----TTTCTTGTTACC 1804031
Query 23327 --ATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTT 23384
| | ||| | ||||| || ||| |||||| ||||||||||||||| ||| ||||
Sbjct 1804032 CAAGGCAAATAATAATCTATCAGCAACATATTCAACATATTGACACATCAAGTCACAGTT 1804091
Query 23385 TATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGC 23444
||||| | || ||||||| |||||| || || |||||||| ||||||
Sbjct 1804092 CATACCCAATAAAGAAACTGGAAGAGCATCAGTGAAATATTCTTTTTCAACATCAACAGC 1804151
Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504
|| ||| || | ||| || |||| | ||| | || || | |||||
Sbjct 1804152 TTCAACAATAATCTTTTCAACAATTTCTGGAGATGGTCTGTGTTGCAAGTGGGAGAACAA 1804211
Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564
||||| ||||||||| ||||| |||||||| |||| ||||||||||| || || ||
Sbjct 1804212 CAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAGATCAATTCATTGGAGAAAGT 1804271
Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624
|| |||||||| || |||| ||||| | ||| || || | ||||||||| || ||
Sbjct 1804272 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTGAA 1804331
Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684
||||||||| |||| ||| ||||| || || | | | | || || |||| | |||
Sbjct 1804332 GAAAATACCTTCAATAGCAGCAAAAGCAACCAATCTTTCAGCATATAAAGCATCTTTATC 1804391
Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744
||||||||| | | ||| | ||| ||| | | ||| ||| ||||||| ||
Sbjct 1804392 TTGAATCCATTTGATGGCCCATTCAGCTTTCTTGGTAATACATGGAATGTTTTCAATGGC 1804451
Query 23745 TTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATA 23804
|| || | ||| ||||| ||| | | ||| || ||||||| |||| |||
Sbjct 1804452 ATTAAACAAGAAATCAGCTTCTTGTGGGTCTTTAACATAAGTTTCAATTAATAAAGAATA 1804511
Query 23805 CATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGA 23864
||||||||||||||| ||||| || || || || ||||| || || ||||||| |
Sbjct 1804512 CATTTCAGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTAGCTTCTGG 1804571
Query 23865 CAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGC 23924
|| ||| || || | |||| ||| | || ||||| ||||||||||||| |||
Sbjct 1804572 CAGTTGGACTTCGGCAGAAAAGTTTTCAATCAAGTTTTCACCAACAATACCATCAGAAGC 1804631
Query 23925 AGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAATTTTTT 23981
||| || || || | ||| | ||||| ||||||| ||| || || || ||
Sbjct 1804632 AGCGAAAAAGGCTAAAACTCTAGAAACAAAATATCTTTCATTGTCATTTAATTTGTTGTT 1804691
Query 23982 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|||||||| | |||||| |||||||||||| ||| ||||| ||
Sbjct 1804692 CCAATCATCCAAATCTTTACTTAAATCAACTTCTTCACAAGTCCAGAA 1804739
Score = 183 bits (202), Expect = 3e-41
Identities = 561/856 (66%), Gaps = 21/856 (2%)
Strand=Plus/Minus
Query 23240 TTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTAG 23299
|||| || ||||| || ||||| | || |||||||||||||| ||||||||||||||||
Sbjct 1025704 TTTCAAAGAAATTGGTTTTACCGGCCAAGGATATATTTTCCATGAAATCAAATGGATTAG 1025645
Query 23300 AAGTATTATATACAGCTTTACATGAT--AATTCCTTTAAAAGCCTATCTGCTACAA-ATT 23356
||||| | | ||| ||| | || | || | ||||| || |||| |||
Sbjct 1025644 TCACGTTATA-ATA-CTTATCATTACCAAAAGCAACCAACAATCTATCGGC-ACAATATT 1025588
Query 23357 CAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCAT 23416
| | ||||||||||||||||||| | || ||||| | | ||||||| |||||||
Sbjct 1025587 CCACATATTGACACATCAAATCACAATTCATACCCAACAAAGAAACTGGAAGCGCATCAC 1025528
Query 23417 ATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTCTTCAC 23476
||| | |||||||| |||||| || | || || | | |||| |
Sbjct 1025527 TGAAGTACTTCTTTTCAATACTAACAGCTTCAGTGATAATCTTTTCTATAATGGAAGGAT 1025468
Query 23477 TAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCAT 23536
|| || | || || ||| | |||||| ||| |||| || | ||||| |
Sbjct 1025467 CCGGCTTATTCTCCAAGTATGAAAATAGTAAACAAGCATAATCGGTGTGAATACCTTCGT 1025408
Query 23537 CCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCC 23596
|||||| ||||||||||| || || ||||| |||||||| || |||| |||||| | ||
Sbjct 1025407 CCCTACAGATCAATTCATTTGAGAAAGTTAAACCTGGCATCAACCCTCTTTTTTTCAACC 1025348
Query 23597 AAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAA 23656
| || || | ||| ||||| || |||||||| || |||| ||| ||||| ||||| |
Sbjct 1025347 AGAAAATGGAAGCGAATGACCCACTGAAGAAAATGCCTTCAATAGCAGCAAATGCCACCA 1025288
Query 23657 GACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTT-- 23714
| | |||| || | | || ||||||| | | | ||||| || ||
Sbjct 1025287 ATCTTTCTGCAAACAAGGCTTCTTCGTCTTGAATCCATCTAATAGCCCAATCTGCTTTTT 1025228
Query 23715 ---CAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT 23771
|||| | | | ||| | ||||| || || || | ||| || | |
Sbjct 1025227 CACCAATGT-----ATTTAATATTGTCAATGGCGTTGAACAAGAAATCGGCCTCCTTAGG 1025173
Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831
||| | | || || ||||||| | ||| |||| ||||| |||||||| ||
Sbjct 1025172 ATCCTTGAAGTAGGTTTCAATTAAAAGGGAATATGTTTCTGAATGGATATTTTCCATCAT 1025113
Query 23832 AATCTGAAACCCATAAAAACATC-TAGCTTCAGACAATTGAACATCATTAAAAAATCTTT 23890
||||| || | ||| || | | ||||||| | || ||| ||| || |||| |||
Sbjct 1025112 GATCTGGAATTTGT-AAACCAGCTTGGCTTCAGGAAGTTTAACTTCAGTACAAAAGTTTT 1025054
Query 23891 TAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTA 23950
| | || ||||| || || |||||||| |||||||| || || | ||| | |
Sbjct 1025053 CAACCAAGTTTTCATTGACTATACCATCTGATGCAGCAAAAAAGGCTAAAACTCTTGAGA 1024994
Query 23951 TAAAATGTCTTTCATC--AGTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAAT 24007
| ||| ||||||||| || || | |||| |||||||| || |||||| || |
Sbjct 1024993 TGAAAAATCTTTCATCTTTATTCATTTTATTTTCCCAATCATCAAAATCTTTACTCAAGT 1024934
Query 24008 CAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
||| ||| || |||||||||| ||| | | ||| || | |||||| |||
Sbjct 1024933 CAATTTCTTCTGCTGTCCAAAATGATGCAACAGATTTCTTGTAGAAAGTCCAAATTTCAG 1024874
Query 24068 TATGTTGTATTGGAAA 24083
|| || |||||||||
Sbjct 1024873 GATATTTTATTGGAAA 1024858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487022210000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |