Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01] 150 sequences; 15,326,821 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq16 104 2e-17 >seq16 Length=329187 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| |||||| |||| ||| | || ||||||||||||||||| || | Sbjct 297499 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 297440 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| || || || ||||||||||| | || ||||||| | Sbjct 297439 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGTG 297382 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || || || || || || ||| | |||||||||| |||||| Sbjct 297381 GAATACCTTCTTTGTCTTGGATTTTAGATTTGACATTGT--CAATGGTGTCGGAGGATTC 297324 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| ||||| || || || || | |||||| ||||| |||||||| Sbjct 297323 GACTTCCAAGGTAATAGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 297273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989741892550