Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20tropicalis_20[genbank_20GCA_5F000633855.1_202014-05-01]
150 sequences; 15,326,821 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq1 205 1e-47
seq2 96.9 5e-15
seq3 84.2 3e-11
>seq1
Length=2377843
Score = 205 bits (226), Expect = 1e-47
Identities = 390/569 (69%), Gaps = 33/569 (6%)
Strand=Plus/Minus
Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532
|||| ||||| ||||| ||||| ||||| ||||||||||| ||||| || || | |
Sbjct 1090744 AAGGTGATTTGGGACCAGTTTATGGTTTCCAATGGAGACACTTTGGTGCTGAATATAAAG 1090685
Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592
|||| || | |||| || ||||| ||||| ||||| | || || | || |
Sbjct 1090684 ATTGTGATGCTGATTATACTGGACAAGGTTATGATCAGTTGCAAGATATCATTAAGAAAT 1090625
Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652
| || | ||||| | ||| | | || | |||| |||||||||||| | ||| | |
Sbjct 1090624 TAAAGTCCAACCCATATGATAGAAGAATAATCATGAGTGCCTGGAATCCACCAGATTTTG 1090565
Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCA------CAGACA 50706
|| ||| | ||||||||| |||||||| || |||||||| |||| | |||| |
Sbjct 1090564 ATAAAATGGCTTTACCTCCATGTCATGTCTTTTGTCAATTCTATGTTAATTTCCCAGAAA 1090505
Query 50707 ATGTT---------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCG 50757
| | | ||||| ||| || ||||| ||||| |||||||||||| || |
Sbjct 1090504 ACGCTAAACCTAAATTATCATGTTTATTGTATCAGAGATCTTGTGATATGGGTTTGGGAG 1090445
Query 50758 TTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATA 50817
||||||||||| | ||||| || ||||| ||||| | |||| ||||| | || ||||
Sbjct 1090444 TTCCTTTCAACATTGCTTCCTATGCTTTGTTAACTAAGATGATTGCTCATGTGGTTGATA 1090385
Query 50818 TGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGTCG 50877
|| | || |||||||||||||| | || || ||||| | || | ||||| || |
Sbjct 1090384 TGGATTGTGGTGAATTTATTCATACTATGGGTGATGCTCACGTGTATTTGGATCATGTGG 1090325
Query 50878 ATGCTTTAAAGGAGCAA-TTGACTCGAACGGTAAAGCCGGCGCCGATTTTAATT-TTAAA 50935
||||||| || || ||| |||| |||| ||| | || | ||| || |||||
Sbjct 1090324 ATGCTTTGAAAGAACAACTTGA-ACGAATTCCAAAACAATTTCCTAAATTAGTTATTAAA 1090266
Query 50936 GAA---AAAATCGATCGAACTAAGA---------GATTTTAAATTTGAAGA-TTTCGAAT 50982
||| | || ||| ||| ||| | ||||| | |||||||| |||| |||
Sbjct 1090265 GAAGATAGAAAAGAT-GAAATAAAATCAATCGACGATTTCGAGTTTGAAGATTTTCAAAT 1090207
Query 50983 TGTTGGATTACGATCCTCATCCTTCTATT 51011
||||||| ||||| || ||||| | |||
Sbjct 1090206 TGTTGGA-TACGAACCATATCCTCCAATT 1090179
>seq2
Length=1666313
Score = 96.9 bits (106), Expect = 5e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948
||||||||||| ||||| |||||| || | | ||| || | || |||||||| |||
Sbjct 220389 CCCTTTTCATCAGGTAAAGAAATTTCGATTTGAATTTCAAATCTACCTGGTCTTAACAAT 220330
Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008
|| |||||||| || | ||||||||||| || | |||||| || || ||
Sbjct 220329 GCAGTATCAATTAAATCCAAACGATTGGTCATACCAATAACTAAAATATTATTCAATTGA 220270
Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046
|| ||||| || ||||| || |||||||||||||| ||
Sbjct 220269 TCAACACCATCCATTTTGGATAATAATTGATTGACAAC 220232
>seq3
Length=1232947
Score = 84.2 bits (92), Expect = 3e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 63716 TCGTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTT 63775
|||| ||| | | | | ||| | | || || || |||| ||||||||||||||||| |
Sbjct 1155533 TCGTCAAAGTTAGAATGAGAACAACCAAGATTCCGCAAATTGGTGATAAATTTGCTTC-T 1155591
Query 63776 TTACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACC 63834
||| | |||||| ||||| ||| | | |||| |||| ||||||||||| || |
Sbjct 1155592 AGACATGGTCAAAAGGGTACTATTGGGGTTACTTATAGACATGAAGATATGCCATTCAGT 1155651
Query 63835 AAAGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACC 63894
||| ||||| || || ||| | | ||||| || || ||| |||| ||||||||
Sbjct 1155652 GCAGAAGGTATTGTCCCAGATTTGATTATCAACCCTCATGCTATTCCATCCCGTATGACA 1155711
Query 63895 GTT 63897
|||
Sbjct 1155712 GTT 1155714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667073949234000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |