Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 1e-59
seq2 111 2e-19
>seq1
Length=4294417
Score = 244 bits (270), Expect = 1e-59
Identities = 1344/2135 (63%), Gaps = 45/2135 (2%)
Strand=Plus/Minus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| || || ||||| | | |||||||| || ||||| || || || |
Sbjct 3286024 GTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCTTCAAT 3285965
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| |||||| || || ||||| || ||||| | |||| || |||
Sbjct 3285964 CCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTTGCATA 3285905
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAA---GGCTCCCCTGTCTGCAGCCATTTTT 52984
|| || || | | || || || || | ||||| | ||||| ||||| |
Sbjct 3285904 TGAATGTTAAGACTCTGTGACTGGTCAATATATGGGGCTCGC---TCTGCTGCCATATCA 3285848
Query 52985 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 53044
|| || | ||| || || ||||| | || || |||| | || || || || ||
Sbjct 3285847 ATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGGG 3285788
Query 53045 AGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101
| || | ||| ||||| || ||||| || | || | | ||| || || || |||
Sbjct 3285787 ATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTCA 3285728
Query 53102 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 53161
||||| || | || || | || | | || | || || || | ||| || |||
Sbjct 3285727 TTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTCT 3285668
Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221
|| | | || | |||| |||| |||| |||||| || || | | | |||||| |
Sbjct 3285667 CCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAAT 3285608
Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281
||||| || || | || || ||||| ||||| || ||||| | || || | | |
Sbjct 3285607 CCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAAA 3285548
Query 53282 CCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 53341
|| || | | ||| || ||||| ||||| ||||| | ||| | || ||
Sbjct 3285547 CCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGCTCACGA 3285488
Query 53342 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTA 53400
||| | | ||| || || | | | ||| | || || |||||
Sbjct 3285487 CCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTA-CCTTCGTAAGTTTCGTA 3285429
Query 53401 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 53460
|| || || | || | |||| ||| | ||| | ||| ||| |||||| |||||
Sbjct 3285428 AGGACCAAACTCCCTCGCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTTC 3285369
Query 53461 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAAT 53520
||| |||| | || || | | | || || |||| ||||||||| ||| ||
Sbjct 3285368 GAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAAA 3285309
Query 53521 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 53580
|| | ||| || || ||||||||||| | | || || | | || | || ||
Sbjct 3285308 GAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAACG 3285249
Query 53581 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAAT 53640
|||||| | |||||| || ||| ||| |||| | ||||| || | ||
Sbjct 3285248 CCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGAT 3285189
Query 53641 TACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTG---TCCATC---------TAT 53688
| |||| ||||||| | ||||| | || ||| | |||||| |
Sbjct 3285188 GATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTTC 3285129
Query 53689 TAC-AAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 53747
||| |||| | ||| || | ||| || ||||| || || || ||| | | ||
Sbjct 3285128 TACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACG 3285070
Query 53748 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 53807
|| | | ||||| |||||| || ||||||| || || | ||||| ||||
Sbjct 3285069 AGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGAT 3285010
Query 53808 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG 53867
|| || ||| || ||||||||||| || || ||||| || ||||| ||| | || |
Sbjct 3285009 TAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAG 3284950
Query 53868 ATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 53927
|||||||| | | ||| | |||| || || | | | | |||| |||
Sbjct 3284949 CCTCTATAATGGAATACCATAGCTTCTGAGCTTTAATGGT-GCGACG-ACCTCTGCCCTC 3284892
Query 53928 --TTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGG 53985
|||| ||| ||||| | | ||| ||||| || || |||||| | || ||
Sbjct 3284891 CTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGG 3284832
Query 53986 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 54045
|| |||| |||||||| | | ||| || || | ||| ||||| || | |||||| |
Sbjct 3284831 GCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAA 3284772
Query 54046 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 54105
|| ||||||||||| || | || | ||| | || | | || || || || |||
Sbjct 3284771 GTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATT 3284712
Query 54106 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCAT 54165
||| | ||| | | | | ||||||| ||||||||| || | || || | |
Sbjct 3284711 CTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAA 3284652
Query 54166 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 54225
| ||||| || ||||| || || || || | || | ||| || ||||| || || |
Sbjct 3284651 GGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACG 3284592
Query 54226 CAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGC 54285
|||||| ||||||| |||||||| | |||||| || || | ||| || || ||||
Sbjct 3284591 CAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTGGC 3284532
Query 54286 ACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCG 54345
|||||| || ||| || || || || || || | || || || || || |||
Sbjct 3284531 ACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTC 3284472
Query 54346 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACAGC 54404
|| | |||||||||||| || || |||||||||||| |||| |||| || || |||
Sbjct 3284471 CTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAG-AAGCAGG 3284413
Query 54405 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 54464
||||||||| | |||||| ||||| | | ||| ||| || || | ||
Sbjct 3284412 AAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGT 3284353
Query 54465 ATTTTTCAGAAAGTAGATT-GTACGTCTCG---ATAGCTGAGTCTATATCCCATTGATGA 54520
|||||| || | | ||| ||| || ||| | ||||| | |||||| |||
Sbjct 3284352 ATTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGG---ATATCCTCGCCATGG 3284297
Query 54521 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 54580
|| || || || || | ||||| |||||||||||||||||| | ||| ||
Sbjct 3284296 ATACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATACCTTACCATTATAC 3284237
Query 54581 TTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 54640
||||||| ||| ||| ||||| || || || || || | ||| | ||||||||
Sbjct 3284236 TTCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCTCGA 3284177
Query 54641 TCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACA--TCCATGGTAA 54698
|| || | || | ||||| ||| |||| | | || || ||| |||| |
Sbjct 3284176 TCATACACTATTGCCGAGTTTAGT---TCCTCAGCGTGCTTCACGACAGTGCCATAGAGC 3284120
Query 54699 TACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCC 54757
| || || || || ||| ||| | ||| ||||| || || | | | | |||
Sbjct 3284119 TCCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTATTCATAAAGATCT 3284060
Query 54758 TTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 54817
||||| || || |||||| | ||||| || | ||||| || || || || || || | |
Sbjct 3284059 TTCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACAGCGATACGA 3284000
Query 54818 GCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTC 54877
|| || |||| ||||||||| || || ||||| | || || ||||||| |
Sbjct 3283999 GCTGCAAGAACGGCATAATCAGGGTGAACGGTAGTCATATAAGCAGCAGTTTCGGCAGCT 3283940
Query 54878 AGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 54912
|| |||| | ||| || || | |||||| || ||
Sbjct 3283939 AGGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905
>seq2
Length=2231275
Score = 111 bits (122), Expect = 2e-19
Identities = 400/622 (64%), Gaps = 14/622 (2%)
Strand=Plus/Plus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
||||| |||||| ||| | |||||| |||| || | || || || ||||| ||
Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|| ||||| || ||||| || || ||||| || ||||| || || || ||| |||||
Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC---CGGCGCTGTCATGT 24311
| || || | |||||||| || | ||| | || || || || | ||||| |
Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTTG 2160670
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG---CATTG-TCTCTATAGC 24367
||||| ||||||| ||||||||| || | | || || || | || || ||
Sbjct 2160671 ATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTGC 2160726
Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 24427
|||||| | ||| || ||| || ||| |||| ||| |||||||| | || ||
Sbjct 2160727 ATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGTA 2160786
Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487
| | || || || || || ||||| || || || || || || || |||||||||
Sbjct 2160787 CGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGGG 2160846
Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547
||||| || || || || || | | || ||||| || || || ||||| ||
Sbjct 2160847 GATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATGC 2160906
Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 24604
|| ||||| || | ||| | || ||||| ||| || | | | | | |
Sbjct 2160907 CGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCATTCATACGATGTTC 2160966
Query 24605 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 24664
||| || | | || || | || | || || | |||||||| ||||||||
Sbjct 2160967 CCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAAAACTCGCCTCTGC 2161026
Query 24665 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGG 24724
|||||| || | |||||| || || || | || || || || ||||| |||| |||
Sbjct 2161027 CTTTTTGTAGTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATCACAAACCTATGTGG 2161086
Query 24725 ATTTTTTGCAAGGATTGGTTCC 24746
|| | |||||| || |||
Sbjct 2161087 GTTCTCCTTAAGGATAGGCTCC 2161108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721458991120
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