Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2 239 5e-58
seq1 111 2e-19
>seq2
Length=2231275
Score = 239 bits (264), Expect = 5e-58
Identities = 419/605 (69%), Gaps = 9/605 (1%)
Strand=Plus/Minus
Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGC-GCATGTA 116649
|||||||| | |||| ||||| ||||| || | |||| || || |||| ||| ||
Sbjct 2161092 GAGAACCCACATAGGTTTGTGATGTTCCCGATCAAGTACCACGAGATCTGGCAGCAC-TA 2161034
Query 116650 CAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAG 116709
||||||||| |||||| || ||||||| ||||||| | |||||| |||||||
Sbjct 2161033 CAAAAAGGCAGAGGCGAGTTTTTGGACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCA 2160974
Query 116710 CGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTT 116766
||||||||| | | |||| | | || || ||||||| | ||||| |||||
Sbjct 2160973 CGACTGGGAACATCGTATGAATGCTGATGAACGTTATTTCATTTCCCGTGTGCTTGCCTT 2160914
Query 116767 TTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGT 116826
|||||| || |||||| ||||||||||| || |||| | |||| | | || ||
Sbjct 2160913 TTTCGCGGCATCCGACGGTATCGTCAACGAAAACTTGGTACAAAATTTCAGTGACGACGT 2160854
Query 116827 GCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTC 116886
||| | ||||||| |||||| || ||||| ||||| || ||||| | |||||
Sbjct 2160853 CCAGATCCCCGAGGCTAAGTGCTTTTATGGCTTCCAGATAATGATTGAGAATATCCACTC 2160794
Query 116887 GGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT-- 116944
|| | ||| || || || || || || | | | | ||||||| |
Sbjct 2160793 TGAGACGTACTCACTACTAATTGATACCTATATTAAGGATCCCAA--AGAAGCTAATTAT 2160736
Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004
||||| || || ||||| | || | | || |||||||||| ||||| || |||
Sbjct 2160735 TTGTTTAATGCAATCGATAACATTGGGCCCATCCGCAAGAAGGCCGACTGGGCTCTTCGC 2160676
Query 117005 TGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAG 117064
|||||| || |||||| | | || | ||||| || || || || |||||| | |||
Sbjct 2160675 TGGATCAACGACAGAGACGTTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAG 2160616
Query 117065 GGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATG 117124
||||||||||| || |||||| |||| || |||||||||||||| || ||||||
Sbjct 2160615 GGCGTCTTCTTCAGTGGGTCTTTCGCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATG 2160556
Query 117125 CCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTT 117184
|| || ||||| ||| || ||||||||||| | || |||||| |||| ||| |||
Sbjct 2160555 CCTGGGCTGACGTTCTCTAATGAGCTCATCTCACGAGATGAGGGTATGCACACCGATTTT 2160496
Query 117185 GCCTG 117189
|| ||
Sbjct 2160495 GCATG 2160491
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || |||||||| || ||||| ||| | || || || || |
Sbjct 1212039 ATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCG 1211980
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | ||| || |||| ||||| ||||| |||||| | |||||
Sbjct 1211979 GATACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 1211920
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || || ||||| || || | ||||||||| |||||||||
Sbjct 1211919 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAAC 1211860
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| |||| || || || ||
Sbjct 1211859 ATCCAGAAGGAGTCCACCCTTCACCTCGT 1211831
>seq1
Length=4294417
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||||||||| || ||||| || || |||||||| || ||||| ||| | || || || |
Sbjct 1826164 AAAAATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGTC 1826223
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| | |||| | | | ||||| || || | ||||| ||||| |||||| ||||
Sbjct 1826224 CTCGGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGA 1826283
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|| || || | || | ||| || || ||||| || || | ||||| || |||||
Sbjct 1826284 TCAACAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTA 1826343
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||| ||||||||| |||| || || || ||| ||||
Sbjct 1826344 CAACATTCAGAAGGAGTCCACCCTCCACCTCGTGCTGCG 1826382
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| |||||||| ||||| |||||||| || || ||||| |||| || || | |
Sbjct 3810511 ATGCAGATATTCGTTAAAACCCTCACGGGAAAGACGATCACTCTCGAAGTGGAGTCTTCG 3810570
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || |||| || || || || || || | || ||
Sbjct 3810571 GACACCATTGACAATGTGAAGTCCAAGATTCAGGATAAGGAAGGTATTCCTCCTGATCAA 3810630
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | |||| || || || ||||| || |||| | || ||| ||||||||
Sbjct 3810631 CAGCGATTGATCTTTGCTGGTAAGCAGCTTGAGGACGGTAGGACTCTCTCTGACTACAAT 3810690
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTT 40907
||||||||||| ||||||| || || || ||||| ||
Sbjct 3810691 ATCCAGAAGGAATCCACGCTTCACCTTGTCTTGCGTTT 3810728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219077635440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |