Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq2 107 2e-18 >seq1 Length=4294417 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || |||||||||||||| || ||| || |||||| || || || ||| Sbjct 3810479 GTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCAAGTTGCTTACCA 3810420 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | |||||||| || || || || ||||||||||| ||| ||| || Sbjct 3810419 GCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTTGACTTC 3810360 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| || |||| ||| ||||| | ||| | ||| |||||||| | ||| Sbjct 3810359 ACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTC 3810300 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 3810299 TTCACAAAGATCTGCAT 3810283 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||||| || ||||||||||| || | |||||| ||| Sbjct 1826380 CAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATC 1826321 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||||||| || || ||| | || | |||||| ||||| || || || ||||||||||| Sbjct 1826320 CTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTC 1826261 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | || | ||||||| | ||| ||||| | ||| | || Sbjct 1826260 CTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGT 1826201 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || ||||||||||| Sbjct 1826200 CTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168 >seq2 Length=2231275 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | ||||| |||||||||||| ||||| Sbjct 1211843 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGCTTTCCG 1211902 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||| || || || || || ||||||||||| ||| || ||| Sbjct 1211903 GCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTA 1211962 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| |||| | ||| ||||| | ||| | || || || || || || Sbjct 1211963 ACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGTGTC 1212022 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||||||||| Sbjct 1212023 TTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830299541148