Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 125 8e-24 >seq1 Length=4294417 Score = 125 bits (138), Expect = 8e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| || | ||||| ||| |||||| ||||| |||||||||| || ||| || | Sbjct 3810497 CGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCA 3810438 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || || |||||||||||||| || | |||||||||||| | || | | ||||||| Sbjct 3810437 TCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTG 3810378 Query 43089 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| | |||| || | | | | || || ||| ||||| || | ||||| Sbjct 3810377 TCC-TGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGAT 3810319 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTT 43185 || ||||| |||| ||||| |||||||| ||||||| Sbjct 3810318 CGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||| | || | ||| |||||| ||||| ||||| |||| ||||| || | Sbjct 1826383 ACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCC 1826324 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| ||||| || | ||||| || || | || | | |||||| Sbjct 1826323 ATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTT 1826264 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | ||||| || || || || | || || Sbjct 1826263 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAAT 1826204 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 ||| || ||||| || ||||| || || || ||||||||| Sbjct 1826203 GGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTTT 1826164 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | ||||||||| || | || | ||| ||||| || |||||||| |||| Sbjct 3810737 CCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAG 3810678 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||||| |||| || |||||||||||||| || || | |||||| || || | || Sbjct 3810677 AGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGA 3810618 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||| ||| ||| | || | || | | | | ||||| || ||||| Sbjct 3810617 ATACCTTCCTTATCC-TGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCAC 3810559 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| || || ||||| || || || || || || ||||| Sbjct 3810558 TTCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817464193320