Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq2 120 2e-22 >seq1 Length=4294417 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 ||||| ||| |||||||||||||||||| || || || | || || ||||| Sbjct 3810485 TGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCAAGTTGC 3810426 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || ||||| ||||| ||||| ||||| || || | ||||||||||||| ||| ||| Sbjct 3810425 TTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTT 3810366 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | ||| ||||||||||| ||| ||||||||||| || Sbjct 3810365 GACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTGCCGGTT 3810306 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||||||||||||| ||||| Sbjct 3810305 AAAGTCTTCACAAAGATCTGCAT 3810283 >seq2 Length=2231275 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| ||||||||||| || |||| | || || || || Sbjct 1211836 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTG 1211895 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||||||||| ||||| ||||||||||| || || | ||||||||||||| ||| || Sbjct 1211896 CTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTT 1211955 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 |||||| | | | | ||| ||| ||||| | |||||| ||||| ||||| Sbjct 1211956 GCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGT 1212015 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || || ||||| Sbjct 1212016 GAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075108515399