Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 1e-33
seq2 138 1e-27
>seq1
Length=4294417
Score = 158 bits (174), Expect = 1e-33
Identities = 1009/1606 (63%), Gaps = 44/1606 (3%)
Strand=Plus/Minus
Query 22396 ATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTT 22455
|||||| || || ||||||||||| ||| | | |||||| | || | ||||
Sbjct 3285743 ATTTTTCATGTCTTCATTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTT 3285684
Query 22456 CACCACTTGAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTT 22514
||| | ||| ||||| || | |||| || || || |||| || || || | || |
Sbjct 3285683 CACGATTTGGAACTCTCCTG-CAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCT 3285625
Query 22515 CGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACA 22574
| ||| ||||||| ||||| |||||| | || || || || |||||||| |||| |
Sbjct 3285624 CAAAACATTCATTAAATCCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAA 3285565
Query 22575 GTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAG--CATCGACCAGTCCCA 22632
|||| ||||| | ||| || | ||| | | ||| ||| || |||| ||||| |||
Sbjct 3285564 GTAGTGAGTTACGCAAACCATACTTAGCCAATTTCTCCTTTAGTTCATC--CCAGTTCCA 3285507
Query 22633 CAGATCGGACGGCGTCACATTGTCCCACATA--TCGTATTGCAACACGCCGCGACTCGCC 22690
| ||| | ||| |||| | ||| |||| || ||||||| | || ||
Sbjct 3285506 TAAATCAGTAGGC-TCAC---GACCC-CATAGGTCAAATTGCAATAAACCCTTGGAAGCA 3285452
Query 22691 GGGCTGCCTTCGTACGTTTCGTACGGACCATA-TATCGCGGCAAGTTCGCAGCTCGCCTC 22749
||||| |||||||| |||||||| |||||| | | | || ||| | || || | |||
Sbjct 3285451 GGGCTACCTTCGTAAGTTTCGTAAGGACCAAACTCCCTCGCCAATTCAACA-CTTGACTC 3285393
Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGC 22808
| ||| ||| ||| || || ||||| || | |||||| | | || || | ||
Sbjct 3285392 GAGTGCGGCGTGATAAATTGTTTCGAATATCTGGATGTTCAGCT-GTCGAGCCTCAGGGC 3285334
Query 22809 TTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGA 22868
| || | || | || | | | ||| | ||| |||| || ||||| |||| | |
Sbjct 3285333 TGTCAAATGGAAGGCGTAACTCAAAGAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAA 3285274
Query 22869 TCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGA 22928
| || ||||| |||| || || | || || || |||||| | || ||| |
Sbjct 3285273 TTGGACGGTTCTTCATGTTTGAACGCCTAGCTTCCTCCACAGGATAGTAGTTACGATCAA 3285214
Query 22929 TTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGT 22988
| || ||| | || | || | ||||| | | | ||||| |
Sbjct 3285213 TAACTCGGTTGAGATTCCGTGTGATGATTTTGGCCACATCATGAAGTTTTTGGAAGTCAT 3285154
Query 22989 AAACGCCCGATTGTA-CAACA--AACTTGTTG----------ACGGCGATCGAGGCAAGA 23035
| || |||| | || || | ||| | | ||| | |||||||||
Sbjct 3285153 A----CCAGATTCCATCACCAGTAGCTTCTACGAAACGCGGCAAGGCCAGAGAGGCAAGA 3285098
Query 23036 TTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTA 23095
||||| || || ||| ||| ||||| |||||| || || ||| || || ||
Sbjct 3285097 TTGCACACTGCAGTCTCCTCTGGGGACGAGTACTCAACGATCTCGCAGCAAAGGTTTGAT 3285038
Query 23096 CACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGC 23155
|||| ||||| || | || ||| || ||| || ||||| | |||||| || |||
Sbjct 3285037 GACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGGTTGCAGGCATCCTTATACAGC 3284978
Query 23156 ATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCG 23215
|| | || || || ||||| || | ||| || || | ||| | |||||||
Sbjct 3284977 ATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTATAATGGAATACCATAGCTTCTGAGCT 3284918
Query 23216 TGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGT--CAAAT 23272
| || || ||| | ||||| || | || || | | ||| || | | | ||
Sbjct 3284917 TTAATGGTGCG-ACGACCTCTGCCCTCCTTTTCATA--TGTCGTATAAAGTTTTTCGAAC 3284861
Query 23273 TCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATT 23332
|| |||||||| || | || || || | | | |||||||| ||| ||||
Sbjct 3284860 TCCTCACCGTAAACATCAGAGAGACCTGGGCACTCATTGGGACACATTAGAGTCCAGTCC 3284801
Query 23333 GAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCG 23392
| || || || || |||||| | || || ||||| || || ||| | ||
Sbjct 3284800 CCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAATCCAAAGTGCAACGAAAATATCA 3284741
Query 23393 CGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCC 23452
||||| || | ||| || || || ||||| || ||| | || || | ||
Sbjct 3284740 CGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCACATCAATGGTATCAAAAATATCA 3284681
Query 23453 GCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCG 23512
||||||||||||| | || | ||||| || || |||| ||| || || || || ||
Sbjct 3284680 TCATGCCACGGCTCAATATACATCGCAAAGGCACCAGGTCGCTTGTTACCACCTTGGTCA 3284621
Query 23513 ACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCG 23572
|| || || || || || ||||| || | | ||| || | || || ||||| | ||
Sbjct 3284620 ACATAGCGAGCAGTATTATTGTAGACACGCAACATGGGAATAAGCCCATTGGAAGTACCA 3284561
Query 23573 CCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCT 23632
| || || | || || | || |||| |||||||| || || || |||
Sbjct 3284560 TTTGTACCAGCGATGTAAGAGCCCGTGGCACGAATGTTGTGAATACTGAGGCCAATTCCT 3284501
Query 23633 CCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTG 23692
||| | || || |||| || |||| || || || || ||||| || || || ||
Sbjct 3284500 CCGGCATTCTTTGAAATCAAGGCACATTCCTTGAGCGTATCATAGATACCATCAATACTA 3284441
Query 23693 TCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAG 23752
|| || || ||| |||||||| || ||||||||||| | || || || | || |
Sbjct 3284440 TCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTTGTGGCTTTGGAGTTCCTGCATTG 3284381
Query 23753 AACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATG 23812
| || || || ||||| || | |||||| | ||||| | ||| || ||||
Sbjct 3284380 TAGAGGGTTGGACTGGCATGAATGAAGTATTTTTGTGACATCCATTGGTAGGTTTCGAGA 3284321
Query 23813 GCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGT 23872
| || || ||||| || || ||||| | ||| || | ||| ||||||| ||||||
Sbjct 3284320 ACAGCTGGGATATCCTCGCCATGGATACCCACGGCAACTCTCATTATCATGTGCTGAGGT 3284261
Query 23873 CTCTCGACCGTGAC--GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930
|| || || | | || ||| || | ||| ||||| || | || || || ||||
Sbjct 3284260 CTTTC--CCATACCTTACCATTATACTTCAGCAGGTATGATCGCTCCAATGTCTTGAATC 3284203
Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
| || | | | || ||||| ||||| | |||||| ||||| ||
Sbjct 3284202 CGAAGAAATTGAAATTGAAGTCTCGATCATACACTATTGCCGAGTT 3284157
Score = 89.7 bits (98), Expect = 5e-13
Identities = 155/222 (70%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 31181 ATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGAC 31240
||| | ||||| |||| || || || |||||| | || ||||| ||||||||| | ||
Sbjct 3810273 ATTTATTCAAA--TGCAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAG 3810330
Query 31241 GTTGAACCGTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGT 31299
|| || |||| || | | |||| | || || || ||| | ||||||||| || |
Sbjct 3810331 GTGGAGTCGTCGGATACTATCGATAATGTGAAGTCAAAGATTCA-GGACAAGGAGGGTAT 3810389
Query 31300 GCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTAT 31359
|| || ||||||||||| | || |||||||| || || | || || ||| |
Sbjct 3810390 TCCACCTGACCAGCAGCGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTT 3810449
Query 31360 GAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
| ||||| |||||||| || || || ||||| ||||| ||
Sbjct 3810450 GTCTGATTACAACATTCAGAAGGAGTCCACTCTGCATCTCGT 3810491
>seq2
Length=2231275
Score = 138 bits (152), Expect = 1e-27
Identities = 407/614 (66%), Gaps = 25/614 (4%)
Strand=Plus/Minus
Query 57525 GAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTAC 57584
||||| || | ||| ||||| ||||| ||||| | || | || || ||| | |||
Sbjct 2161092 GAGAACCCACATAGGTTTGTGATGTTCCCGATCAAGTACCACGAGATCTGGCAGCACTAC 2161033
Query 57585 AAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGC 57644
||||||||||| || |||||||||| ||| || | |||||| ||||| || |
Sbjct 2161032 AAAAAGGCAGAGGCGAGTTTTTGGACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCAC 2160973
Query 57645 GATTGGGATTCCCTC-AAAGAAT-CTGA-GA--GAAATTTTATTAAACACGTGTTGGCGT 57699
|| ||||| | || | |||| |||| || | |||| ||| | ||| | || |
Sbjct 2160972 GACTGGGA--ACATCGTATGAATGCTGATGAACGTTATTTCATTTCCCGTGTGCTTGCCT 2160915
Query 57700 TTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGA 57757
||||||| |||||||| ||||| || ||||| || ||||| | | | ||||| | ||
Sbjct 2160914 TTTTCGCGGCATCCGACGGTATCGTCAACGAAAACTTGGT--ACAAAATTTCAGTGACGA 2160857
Query 57758 AGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCA 57817
|| || | | ||||| | |||||||| || || || | ||||| || | ||
Sbjct 2160856 CGTCCAGATCCCCGAGGCTAAGTGCTTTTATGGCTTCCAGATAATGATTGAGAATATCCA 2160797
Query 57818 TTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA---CAACGACGAGAAACG 57874
|| || | ||| || ||||| || ||||| || | ||||| ||| || | ||
Sbjct 2160796 CTCTGAGACGTACTCACTACTAATTGATACCTATATTAAGGATCCCAAAGAAGCTAA--- 2160740
Query 57875 TAGACTGTTCAACGCGATCGA-AACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAA 57933
| |||| || || ||||| |||| || | | ||| ||||||||| || ||| |
Sbjct 2160739 TTATTTGTTTAATGCAATCGATAACATTGGGC-CCATCCGCAAGAAGGCCGACTGGGCTC 2160681
Query 57934 TCAAATGGATAAAAAGCGCCACGGCC---ACGTTCGCCGAGAGGCTAATCGCGTTCGCCG 57990
| ||||| || || || | | || || || ||| | || |||| || || |
Sbjct 2160680 TTCGCTGGATCAA---CGACAGAGACGTTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGG 2160624
Query 57991 CCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCG 58050
|| | || || | ||||| || || || | || || ||| | |||||||| |
Sbjct 2160623 CCATTGAGGGCGTCTTCTTCAGTGGGTCTTTCGCATCCATTTTCTGGCTCAAGAAACGTG 2160564
Query 58051 GCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATA 58110
| || ||||| || |||||||| || ||| | || || || || |||||| | || |
Sbjct 2160563 GTCTCATGCCTGGGCTGACGTTCTCTAATGAGCTCATCTCACGAGATGAGGGTATGCACA 2160504
Query 58111 CTGATTTTGCGTGC 58124
| |||||||| |||
Sbjct 2160503 CCGATTTTGCATGC 2160490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766294130480
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