Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 105 1e-17 >seq2 Length=2231275 Score = 105 bits (116), Expect = 1e-17 Identities = 293/444 (66%), Gaps = 13/444 (3%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| || ||||| || |||| || ||||||| ||||| | |||||||||||||||| Sbjct 2160638 TTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGTGGGTCTTTCGCATCCATTTTCT 2160579 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | ||| | ||||||| || || | ||| |||||| |||| || | | Sbjct 2160578 GGCTCAAGAAACGTGGTCTCATGCCTGGGCTGACGTTCTCTAATGAGCTCATCTCACGAG 2160519 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | || ||| | || ||| ||||||||| | |||| || | | || | Sbjct 2160518 ATGAGGGTATGCACACCGATTTTGCATGCGTCTTGTT------CGGCCATCTCACTA-AC 2160466 Query 102096 CATCAAGAGAA-AGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151 | || ||| |||||| |||| ||| | ||||| || ||| ||||| | || Sbjct 2160465 CGTCCCTCGAAGAGGATTGTTGAGCGCATTATAACTGAGGCTGTCGATATTGAGCTCGAC 2160406 Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGC-AAGTTGATGAGCCA 102210 || | | | | || |||||| || | || ||||| ||| ||| | ||| || Sbjct 2160405 TTCTGGGCTGATGCGCTTCCTGTTTCGTTGCTTGGTATGAA-TGCTAAGCTCATGGATCA 2160347 Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270 ||| ||| |||| || || ||| | | || | | || || ||| || || Sbjct 2160346 GTATATTCAATTCGTTGCTGATCGTTTGCTCGTGGCCCTCGGTAACGAGAAGGTGTACAA 2160287 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTT 102330 ||||| ||||| ||| |||||||| |||||||| |||| ||||| ||||| || Sbjct 2160286 GGTTACGAACCCTTTCGACTTCATGGAAAATATTTCTCTCGCTGGAAAGACAAACTTCTT 2160227 Query 102331 TGAAAAGAGAGTCGCCGAGTATCA 102354 || || | ||| | || ||||| Sbjct 2160226 CGAGAAACGGGTCTCTGATTATCA 2160203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583759098145