Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 241 2e-58
seq2 129 7e-25
>seq1
Length=4294417
Score = 241 bits (266), Expect = 2e-58
Identities = 1343/2134 (63%), Gaps = 43/2134 (2%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| || || ||||| | | |||||||| || ||||| || || || |
Sbjct 3286024 GTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCTTCAAT 3285965
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| |||||| || || ||||| ||| ||||| | |||| || |||
Sbjct 3285964 CCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTTGCATA 3285905
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAA---GGCTCCCCTGTCTGCAGCCATTTTT 62222
|| || || | | || || || || | ||||| | ||||| ||||| |
Sbjct 3285904 TGAATGTTAAGACTCTGTGACTGGTCAATATATGGGGCTCGC---TCTGCTGCCATATCA 3285848
Query 62223 ATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 62282
|| || | ||| || || ||||| | || || |||| | || || || || ||
Sbjct 3285847 ATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGGG 3285788
Query 62283 AGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339
| || | ||| ||||| || ||||| || | || | | ||| || || || |||
Sbjct 3285787 ATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTCA 3285728
Query 62340 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCT 62399
||||| || | || || | || | | || | ||||| || | |||||| |||
Sbjct 3285727 TTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTCT 3285668
Query 62400 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTT 62459
|| | | || | |||| |||| |||| |||||| || || | | |||||| |
Sbjct 3285667 CCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAAT 3285608
Query 62460 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62519
||||| || || | || || ||||| ||||| || ||||| | || || | | |
Sbjct 3285607 CCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAAA 3285548
Query 62520 CCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACA 62579
|| || | | ||| || ||||| | ||||| ||||| | ||| | || || |
Sbjct 3285547 CCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGCTCACGA 3285488
Query 62580 NNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCATA 62638
| |||| | | ||| || || | | | ||| | || || || ||
Sbjct 3285487 CCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTA-CCTTCGTAAGTTTCGTA 3285429
Query 62639 TGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62698
|| || || | || | || | ||| | ||| | ||| ||| |||||| |||||
Sbjct 3285428 AGGACCAAACTCCCTCGCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTTC 3285369
Query 62699 AAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAAT 62758
|| |||| | || || | | | || || ||||| ||||||||| ||| ||
Sbjct 3285368 GAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAAA 3285309
Query 62759 AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62818
|| | ||| || || ||||||||||| | | || || | | || | || ||
Sbjct 3285308 GAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAACG 3285249
Query 62819 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT 62878
|||||| | |||||| || ||| ||| |||| | |||||||| | ||
Sbjct 3285248 CCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGAT 3285189
Query 62879 TACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC---CCATC---------TAT 62926
| |||| ||||||| | ||||| | || ||| | | ||||| |
Sbjct 3285188 GATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTTC 3285129
Query 62927 TAC-AAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCG 62985
||| |||| | ||| || | ||| || ||||| ||||| || ||| | | ||
Sbjct 3285128 TACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACG 3285070
Query 62986 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGAT 63045
|| | | ||||| |||||| || ||||||| || || | ||||| ||||
Sbjct 3285069 AGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGAT 3285010
Query 63046 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63105
|| || ||| || ||||||||||| || || ||||| || ||||| ||| | ||||
Sbjct 3285009 TAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAG 3284950
Query 63106 ATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCT 63164
|||||||| | | ||| | | || |||| || || | ||| | ||
Sbjct 3284949 CCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGTGCGACGACCTCTGCCCTCC 3284891
Query 63165 CTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGA 63224
|||| ||| ||||| | | ||||||||| || || |||||| | | ||
Sbjct 3284890 TTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGGG 3284831
Query 63225 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63284
|| |||| |||||||| | | ||| || || | ||| ||||| || | |||||| |
Sbjct 3284830 CACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAAG 3284771
Query 63285 TCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTC 63344
|| ||||||||||| || | || | ||| | | | | || || || || ||||
Sbjct 3284770 TCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTC 3284711
Query 63345 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63404
|| | ||| | | | | ||||||| ||||||||| || | || || || |
Sbjct 3284710 TTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAG 3284651
Query 63405 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63464
| ||||| || ||||| || || || || | || | ||| || ||||| || || | |
Sbjct 3284650 GCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACGC 3284591
Query 63465 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCA 63524
||||| ||||||| || || || ||||||| ||||| | ||| || || |||||
Sbjct 3284590 AACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTGGCA 3284531
Query 63525 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63584
||||| || ||| || || ||||| || || | || || || || || |||
Sbjct 3284530 CGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTCC 3284471
Query 63585 TTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCAT-GTTAAGTAGAAAACAGCT 63643
|| | ||| |||||||| || || || |||||||| |||| |||| || || |||
Sbjct 3284470 TTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAG-AAGCAGGA 3284412
Query 63644 AGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63703
||||||||| | | |||||| ||||| | | ||| ||| || || | || |
Sbjct 3284411 AGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTA 3284352
Query 63704 TTTTTCAGAAAGTAGATT-GTACGTCTC---AATAGCTGAGTCTATATCCCATTGATGAA 63759
||||| || | | ||| ||| || || || ||||| | |||||| ||| |
Sbjct 3284351 TTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGG---ATATCCTCGCCATGGA 3284296
Query 63760 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTT 63819
| || || || || | ||||| |||||||||||||||||| | || || |
Sbjct 3284295 TACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATACCTTACCATTATACT 3284236
Query 63820 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63879
||| || ||| ||| ||||| || || || || || | ||| | |||||||| |
Sbjct 3284235 TCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCTCGAT 3284176
Query 63880 CGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATA--TCCATGGTAAT 63937
| || | || |||| || || |||| | | || || | | |||| | |
Sbjct 3284175 CATACACTATTGCCGAGTTTAG---TTCCTCAGCGTGCTTCACGACAGTGCCATAGAGCT 3284119
Query 63938 ACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63996
|| || || || ||| ||| | ||| |||||||| || | | | ||| |
Sbjct 3284118 CCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTATTCATAAAGATCTT 3284059
Query 63997 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGG 64056
||| || || |||||| | ||||| || | |||||| || || || | || || | |
Sbjct 3284058 TCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACAGCGATACGAG 3283999
Query 64057 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 64116
| || |||| ||||||||| || || ||||| | || || ||||||| || |
Sbjct 3283998 CTGCAAGAACGGCATAATCAGGGTGAACGGTAGTCATATAAGCAGCAGTTTCGGCAGCTA 3283939
Query 64117 GAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64150
| |||| | ||| || || | |||||| || ||
Sbjct 3283938 GGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905
>seq2
Length=2231275
Score = 129 bits (142), Expect = 7e-25
Identities = 404/622 (65%), Gaps = 14/622 (2%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
||||| |||||| ||||| |||||| |||| || | || ||||| ||||| ||
Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || ||||| || || ||||| || ||||| ||||| || || ||||||
Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC---CGGCGCTGTCATGT 33758
| || || | || ||||| || | ||| | ||| || || || | ||||| |
Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTTG 2160670
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG---CATCGTT-TCTATGGC 33814
||||| ||||||| ||||||||| || | | || || ||| || || ||
Sbjct 2160671 ATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTGC 2160726
Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874
|||||| | ||| || ||| || ||| |||| ||| ||||| || | || ||
Sbjct 2160727 ATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGTA 2160786
Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934
| | || || || || || ||||| ||||| || || || || || |||||||||
Sbjct 2160787 CGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGGG 2160846
Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994
||||| || || || || || | | || ||||| || || || || || ||
Sbjct 2160847 GATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATGC 2160906
Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 34051
|| ||||| || | ||| | || ||||| ||| || | | | | | |
Sbjct 2160907 CGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCATTCATACGATGTTC 2160966
Query 34052 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 34111
||| || | | || || | || | || || | |||||||| ||||||||
Sbjct 2160967 CCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAAAACTCGCCTCTGC 2161026
Query 34112 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGG 34171
|||||| || | |||||| || || || | ||| ||||| || ||||| |||| |||
Sbjct 2161027 CTTTTTGTAGTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATCACAAACCTATGTGG 2161086
Query 34172 ATTTGGTGCAAGGATAGGTTCC 34193
|| ||||||||| |||
Sbjct 2161087 GTTCTCCTTAAGGATAGGCTCC 2161108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817450418320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |