Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 334 1e-86 seq2 127 3e-24 >seq1 Length=4294417 Score = 334 bits (370), Expect = 1e-86 Identities = 1367/2134 (64%), Gaps = 43/2134 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| || || ||||| | | |||||||| || ||||| || || || | Sbjct 3286024 GTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCTTCAAT 3285965 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||||| ||||| ||||| ||| ||||| | |||| || ||| Sbjct 3285964 CCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTTGCATA 3285905 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAA---GGCTCCCCTGTCTGCAGCCATTTTT 78894 || || || | | || || || || | ||||| | ||||| ||||| | Sbjct 3285904 TGAATGTTAAGACTCTGTGACTGGTCAATATATGGGGCTCGC---TCTGCTGCCATATCA 3285848 Query 78895 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 78954 || || | ||| || || ||||| | || || |||| | || || || || || Sbjct 3285847 ATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGGG 3285788 Query 78955 AGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCA 79011 | || | ||| ||||| || ||||| || || || | | ||| || || |||||| Sbjct 3285787 ATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTCA 3285728 Query 79012 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 79071 ||||| || | || || | || | | || | || || || | ||| || ||| Sbjct 3285727 TTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTCT 3285668 Query 79072 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTT 79131 || | | || | |||| |||| |||| |||||| || || | |||||||| | Sbjct 3285667 CCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAAT 3285608 Query 79132 CCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 79191 ||||| || || | || || || |||||||| || ||||| | || || | | | Sbjct 3285607 CCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAAA 3285548 Query 79192 CCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAAC 79250 || || | | | |||| || ||||| ||||| | ||| | ||||| || || Sbjct 3285547 CCATACTTAGCCAATTTC-TCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGCTCACG 3285489 Query 79251 ATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATA 79310 | ||| || ||| |||| | | ||| || ||| ||| ||| ||||| || Sbjct 3285488 ACCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTACCTTCGTAAGTTTCGTA 3285429 Query 79311 AGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370 ||| || || || |||||| ||| | ||| | ||| ||| |||||| ||||| Sbjct 3285428 AGGACCAAACTCCCTCGCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTTC 3285369 Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAAT 79430 ||| |||| | || || | | | || || |||| ||||||||| ||| || Sbjct 3285368 GAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAAA 3285309 Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490 || | ||| || || ||||||||||| | | || || | | || | || ||| Sbjct 3285308 GAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAACG 3285249 Query 79491 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTAT 79550 |||||| | |||||| || ||| ||| |||| | |||||||||| || Sbjct 3285248 CCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGAT 3285189 Query 79551 TACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCG---TCCATC---------TAT 79598 | |||| ||||||| | ||||| | || ||| | | |||||| | Sbjct 3285188 GATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTTC 3285129 Query 79599 TAC-AAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 79657 ||| |||| | ||| || | ||| || ||||| || || || ||| | | || Sbjct 3285128 TACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACG 3285070 Query 79658 CATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGAT 79717 || | | || || ||| ||||| |||| || || || | ||||| |||| Sbjct 3285069 AGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGAT 3285010 Query 79718 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAG 79777 || || ||| || ||||||||||| || || || || || ||||| ||| | |||| Sbjct 3285009 TAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAG 3284950 Query 79778 ATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATA-GACTTGTATCTCTTTTC 79835 |||||||| | | ||| | | || |||| || || | ||| | |||| | Sbjct 3284949 CCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGTGCGACG---ACCTCTGCCC 3284894 Query 79836 TC--TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 || |||| ||| ||||| | | ||||||||| || || ||||||| | || Sbjct 3284893 TCCTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCT 3284834 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 || || || | |||||||| | | ||| || |||| ||| || || || | |||||| Sbjct 3284833 GGGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAAT 3284774 Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013 | || ||||||||||| || | || | ||| | || | | ||| || || || | Sbjct 3284773 AAGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGA 3284714 Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073 ||||| | ||| | | | | ||||||| ||||||||| || | || || || Sbjct 3284713 TTCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCA 3284654 Query 80074 ATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 80133 | | || ||||| ||||| || || || || | || | ||| || ||||| || || Sbjct 3284653 AAGGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACA 3284594 Query 80134 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTG 80193 | |||||| ||||||| |||||||| |||||||| || || | ||| || || || Sbjct 3284593 CGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTG 3284534 Query 80194 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 80253 |||||||| || ||| || || ||||| || || | || || || || || ||| Sbjct 3284533 GCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACAT 3284474 Query 80254 CGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCAT-GTTAAGTAGAAAACA 80312 || | |||||||||||| || || || |||||||| |||| |||| || || || Sbjct 3284473 TCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAG-AAGCA 3284415 Query 80313 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 80372 | ||||||||| | |||||| ||||| | | ||| ||| || || | || Sbjct 3284414 GGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAA 3284355 Query 80373 CCATTTTTCAGACAGTAGATT-GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAA 80431 |||||| |||| | ||| ||| || || | | | | | |||||| ||| | Sbjct 3284354 GTATTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCATGGA 3284296 Query 80432 TTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 80491 | || || || || | ||||| |||||||||||||||||| | ||| ||| | Sbjct 3284295 TACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATACCTTACCATTATACT 3284236 Query 80492 TCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 80551 ||| || ||| ||| ||||| || || || || || | ||| | |||||||| | Sbjct 3284235 TCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCTCGAT 3284176 Query 80552 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA--TCCATGGTGAT 80609 | || | || ||||||| ||| |||| | | || || ||| |||| | | | Sbjct 3284175 CATACACTATTGCCGAGTTTAGT---TCCTCAGCGTGCTTCACGACAGTGCCATAGAGCT 3284119 Query 80610 ACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 80668 || || || || ||| ||| | ||| |||||||| || | | | ||| | Sbjct 3284118 CCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTATTCATAAAGATCTT 3284059 Query 80669 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 80728 ||| || || |||||| | ||||| || | |||||| || || || || || || | | Sbjct 3284058 TCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACAGCGATACGAG 3283999 Query 80729 CGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 80788 | || | || ||||||||| || || ||||| | || || ||||||| || | Sbjct 3283998 CTGCAAGAACGGCATAATCAGGGTGAACGGTAGTCATATAAGCAGCAGTTTCGGCAGCTA 3283939 Query 80789 GAGTGTCCAATTCTACCGTTGTTACTCCATTATA 80822 | |||| | ||| || || | |||||| || || Sbjct 3283938 GGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905 >seq2 Length=2231275 Score = 127 bits (140), Expect = 3e-24 Identities = 253/372 (68%), Gaps = 11/372 (3%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 ||||| |||||| ||||| |||||| |||| || || || || || ||||| || Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || ||||| || || ||||| || ||||| || || |||||| |||||| Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGT 50136 | || || | || ||||| || ||||| | ||| || || | || ||||| | Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTTG 2160670 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG---CATCGTT-TCTATGGC 50192 ||||| ||||||| ||||||||| || | | || || ||| || || || Sbjct 2160671 ATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTGC 2160726 Query 50193 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 50252 |||||| | ||| || ||| || ||| |||| ||| ||||| || | || || Sbjct 2160727 ATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGTA 2160786 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 | | || || || || || ||||| ||||| || || || || || ||||||||| Sbjct 2160787 CGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGGG 2160846 Query 50313 AATCTGCACTTC 50324 ||||| || || Sbjct 2160847 GATCTGGACGTC 2160858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268629411160