Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 277 2e-69 seq2 113 6e-20 >seq1 Length=4294417 Score = 277 bits (306), Expect = 2e-69 Identities = 1362/2150 (63%), Gaps = 49/2150 (2%) Strand=Plus/Minus Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847 ||||| || | || || ||||| || | ||||| || | |||||||| || ||||| Sbjct 3286037 TTCCTGATCAACAGTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACAT 3285978 Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907 ||||| || | || |||||| || || ||||| ||| ||||| | | | Sbjct 3285977 ACCTGTCTTCAATCCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGT 3285918 Query 70908 AGGATCGGCTATGTGAATATTCATCGACT----GACT--TTGATCGATGAAGGCTCCCCT 70961 || | || ||||| || | |||| |||| | || ||| ||||| | Sbjct 3285917 CGGTGCTTGCATATGAATGTTAA--GACTCTGTGACTGGTCAATATATGG-GGCTCGC-- 3285863 Query 70962 GTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCG 71021 ||||| ||||| | || || | ||| || || ||||| | || || |||| | Sbjct 3285862 -TCTGCTGCCATATCAATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTG 3285804 Query 71022 CTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCT 71078 || || || || || | || | ||| ||||| || ||||| || ||||| | | Sbjct 3285803 TTTCATGTCATCGGGGATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCG 3285744 Query 71079 ATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 71138 |||||| || ||||||||||| || | || || | || | | || | || || Sbjct 3285743 ATTTTTCATGTCTTCATTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTT 3285684 Query 71139 AACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTC 71198 || | ||| || ||||| | | || | ||||| |||| |||| |||||| || || Sbjct 3285683 CACGATTTGGAACTCTCCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTC 3285624 Query 71199 CACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 71258 | | |||||| |||||| || || | || || ||||| ||||| || ||||| | Sbjct 3285623 AAAACATTCATTAAATCCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAG 3285564 Query 71259 TAGACTATTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAA 71317 ||| || | | ||||| | | | |||| || ||||| ||||| ||||| | Sbjct 3285563 TAGTGAGTTACGCAAACCATACTTAGCCAATTTC-TCCTTTAGTTCATCCCAGTTCCATA 3285505 Query 71318 GATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATC 71377 ||| | || || | || || ||| | Sbjct 3285504 AATCAGTAGGCTCACGACCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTAC 3285445 Query 71378 CTGCATATGTATCGTATGGTCCTT-CTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCT 71436 || | || || ||||| || || || ||| | | |||| ||| | ||| | ||| Sbjct 3285444 CTTCGTAAGTTTCGTAAGGACCAAACTCCCTCGCCAA-TTCAACACTTGACTCGAGTGCG 3285386 Query 71437 CCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAAT 71496 | | |||||| |||||||| |||| | || || | | | || || ||||| |||||| Sbjct 3285385 GCGTGATAAATTGTTTCGAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAAT 3285326 Query 71497 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTG 71556 ||| ||| || || | ||| || || |||||||| || | | || || | | Sbjct 3285325 GGAAGGCGTAACTCAAAGAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGG 3285266 Query 71557 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 71616 | || | || ||| |||||| | |||||| || ||| ||| |||| | Sbjct 3285265 TTCTTCATGTTTGAACGCCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGG 3285206 Query 71617 TTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATC---TC 71673 |||||||| | || | |||| ||||||| | ||||| | || ||| | | | Sbjct 3285205 TTGAGATTCCGTGTGATGATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATT 3285146 Query 71674 CCATC---------TATTAC-AAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGC 71723 ||||| | ||| |||| || |||||| | ||| || ||||| || || || Sbjct 3285145 CCATCACCAGTAGCTTCTACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGC 3285087 Query 71724 TACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGT 71783 ||| | | | || | | || || |||||| || ||||||| || Sbjct 3285086 AGTCTCCTCTGGGGACGAGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGT 3285027 Query 71784 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGT 71843 || | ||||| |||||| || ||| || ||||||||||| || ||||| || || Sbjct 3285026 ACCAAGGTTTTGCTGATTAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGT 3284967 Query 71844 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAT 71902 ||||| ||| | |||| |||||||| | | ||| | | || |||| || || | Sbjct 3284966 TCCAGTCTCAGTTTGAGCCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGTG- 3284909 Query 71903 TCTTGTATCTCTTTTCTC--TTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCA 71960 | | |||| ||| |||| ||| ||||| | | ||||||||| || || | Sbjct 3284908 -CGACGACCTCTGCCCTCCTTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTA 3284850 Query 71961 AGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATT 72020 | ||| | || || || ||||| |||||||| | | ||| || |||| ||| || Sbjct 3284849 AACATCAGAGAGACCTGGGCACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTT 3284790 Query 72021 TACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 72080 || || | |||||| | || ||||||||||| || | || | ||| | || | | Sbjct 3284789 CACCCGCTGCATAAATAAGTCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAAT 3284730 Query 72081 CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 72140 ||| || || || |||||| | ||| | | | | ||||||| ||||||||| Sbjct 3284729 CTCTTCCTTACCATGATTCTTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGG 3284670 Query 72141 TTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 72200 || | || || || | | || || || ||||| || || || || | || | ||| Sbjct 3284669 CTCAATATACATCGCAAAGGCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGC 3284610 Query 72201 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 72260 || ||||| || || | |||||| ||||||| |||||||| | |||||| || || | Sbjct 3284609 AGTATTATTGTAGACACGCAACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGC 3284550 Query 72261 GATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTT 72320 ||| || || |||||||||| ||| ||| || || ||||| || || | || Sbjct 3284549 GATGTAAGAGCCCGTGGCACGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTT 3284490 Query 72321 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 || || || || ||| || | |||||||||||| || || |||||||||||| |||| Sbjct 3284489 TGAAATCAAGGCACATTCCTTGAGCGTATCATAGATACCATCAATACTATCATCCTTCAT 3284430 Query 72381 -GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 72439 |||| || || ||| ||||||||| | |||||| ||||| | | ||| | Sbjct 3284429 CGTTACCAAG-AAGCAGGAAGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTG 3284371 Query 72440 GAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT-GTACGTCTCAATAGCTGATTCT 72498 || || || | || |||||| |||| | ||| ||| || || | | | | | Sbjct 3284370 GACTGGCATGAATGAAGTATTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGG 3284312 Query 72499 ATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACG 72558 |||||| ||| || || || || || | ||||| ||| |||||||||||||| Sbjct 3284311 ATATCCTCGCCATGGATACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCAT 3284252 Query 72559 ATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 72618 | ||| ||| |||| || ||| ||| ||||| || || || || || | ||| Sbjct 3284251 ACCTTACCATTATACTTCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTG 3284192 Query 72619 TATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACT 72678 | |||||||| || || | || |||| || ||| |||| | | || || Sbjct 3284191 AAATTGAAGTCTCGATCATACACTATTGCCGAGTTTAGT---TCCTCAGCGTGCTTCACG 3284135 Query 72679 ATA--TCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735 | | |||| | | | || || || || ||| ||| | ||| |||||||| Sbjct 3284134 ACAGTGCCATAGAGCTCCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACG 3284075 Query 72736 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 72795 || | | | ||| | ||| || || |||||| | ||||| || | |||||| || || Sbjct 3284074 TATTCATAAAGATCTTTCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTC 3284015 Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCT 72855 || || || || | || || |||| ||||||||| || || ||||| | || Sbjct 3284014 GAAACAGCGATACGAGCTGCAAGAACGGCATAATCAGGGTGAACGGTAGTCATATAAGCA 3283955 Query 72856 GCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || |||| || || || |||| | ||| || || | |||||| || || Sbjct 3283954 GCAGTTTCGGCAGCTAGGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905 >seq2 Length=2231275 Score = 113 bits (124), Expect = 6e-20 Identities = 286/432 (66%), Gaps = 11/432 (3%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 ||||| |||||| ||||| ||||||||||| || | || || || ||||| || Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || ||||| || || ||||| || || || || || || ||| |||||| Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241 | || || | |||||||| || | ||| | ||| || | | || | ||||| | Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTTG 2160670 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG---CATCGTT-TCTATGGC 42297 ||||| ||||||| ||||||||| || | | || || ||| || || || Sbjct 2160671 ATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTGC 2160726 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 |||||| | ||| || ||| || ||| |||| ||| ||||| || | || || Sbjct 2160727 ATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGTA 2160786 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 | | || || || || || ||||| ||||| || || || || || | ||||||| Sbjct 2160787 CGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGGG 2160846 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 | ||| || || || || || | || |||||||| || || ||||| || Sbjct 2160847 GATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATGC 2160906 Query 42478 TGCAAAAAACGC 42489 || ||||| || Sbjct 2160907 CGCGAAAAAGGC 2160918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139040604440