Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 seq2 125 2e-23 >seq1 Length=4294417 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| ||||| |||||||| ||||| |||||||| || || || || ||| Sbjct 3810707 GTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTCAAGCTGCTTACCA 3810648 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||||||||||||||| || ||||| |||||||||||||| | || Sbjct 3810647 GCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGAATCTTGGACTTC 3810588 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || || || || || || || || ||||| || || || ||| Sbjct 3810587 ACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGTCTTTCCCGTGAGGGTT 3810528 Query 104543 TTTACAAATATCTGCAT 104559 || || ||||||||||| Sbjct 3810527 TTAACGAATATCTGCAT 3810511 Score = 122 bits (134), Expect = 2e-22 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || |||||||| ||||| | || || || || || || || Sbjct 1826364 GTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCG 1826305 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| | | ||||||||| || || ||||| || || ||||| ||||| | || Sbjct 1826304 GCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 1826245 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || | ||| || ||||| || ||||| |||||||| || || || Sbjct 1826244 ACATTGTCAATAGTGTC-CGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGGGT 1826186 Query 104542 TTTTACAAATATCTGCATTTT 104562 || || || ||||||||||| Sbjct 1826185 CTTAACGAAAATCTGCATTTT 1826165 Score = 111 bits (122), Expect = 4e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || |||||||| || || ||||| | ||| | || || || Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 ||||| || ||||| ||||| | | ||| || ||||| || || || || || |||||| Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||||| || ||||| || | ||||| | || ||||| | || || ||||| Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTG 3810312 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTT 104561 || || | || || ||||| |||||||||| Sbjct 3810311 CCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281 >seq2 Length=2231275 Score = 125 bits (138), Expect = 2e-23 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || |||||||| || || | ||| || Sbjct 1211827 AAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATC 1211886 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||| || || || | | |||||| ||||| || || || || || || Sbjct 1211887 CTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTC 1211946 Query 104467 CTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATA 104524 ||||||| ||||| || ||||| || | |||||| | ||| || ||||| || ||||| Sbjct 1211947 CTGAATC-TTGCTCTTAACATTGTCGATGGTATC-CGAGGACTCAACCTCAAGGGTAATG 1212004 Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || ||||| || || || |||||||| Sbjct 1212005 GTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398119706452