Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2 93.3 4e-14 >seq1 Length=4294417 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || | ||| || ||| |||||| |||||||||||||||| ||| || | ||| Sbjct 3810494 AAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCC 3810435 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || || |||||||| || |||| || |||||||| || || | || ||||||||| Sbjct 3810434 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC 3810375 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| || ||| | | | || ||||| | |||||| ||| | || || || Sbjct 3810374 TGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTC 3810315 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| | ||| |||||||| |||||||| Sbjct 3810314 TTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||| |||||| ||||||||||| |||| | | || || | ||||| ||||| Sbjct 1826370 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGC-CATCCTCGAGCTG 1826312 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||||||| || |||| |||||||| |||||| || | | ||||||||| || || Sbjct 1826311 CTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTT 1826252 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | | || || || | ||||| ||| | || ||||| ||||| || Sbjct 1826251 GGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGT 1826192 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || || ||||||||||| Sbjct 1826191 GAGGGTCTTAACGAAAATCTGCAT 1826168 >seq2 Length=2231275 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| |||||| || |||||||| |||| | || | ||||| |||||| Sbjct 1211837 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGC 1211896 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || |||||||| || || || | || ||||||||| ||| || Sbjct 1211897 TTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTG 1211956 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||| | | | |||||||| | ||||| ||| | || ||||| ||||| ||| Sbjct 1211957 CTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTG 1212016 Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727 || || || || |||||||||||| Sbjct 1212017 AGTGTCTTGACGAAAATCTGCATC 1212040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251102454019