Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 2e-17
seq2 93.3 4e-14
>seq1
Length=4294417
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574
|| || | ||| || ||| |||||| |||||||||||||||| ||| || | |||
Sbjct 3810494 AAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCC 3810435
Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634
|| || |||||||| || |||| || |||||||| || || | || |||||||||
Sbjct 3810434 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC 3810375
Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694
||| || ||| | | | || ||||| | |||||| ||| | || || ||
Sbjct 3810374 TGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTC 3810315
Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| | ||| |||||||| ||||||||
Sbjct 3810314 TTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||| |||||| ||||||||||| |||| | | || || | ||||| |||||
Sbjct 1826370 TGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGC-CATCCTCGAGCTG 1826312
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||||||| || |||| |||||||| |||||| || | | ||||||||| || ||
Sbjct 1826311 CTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTT 1826252
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||||| | | || || || | ||||| ||| | || ||||| ||||| ||
Sbjct 1826251 GGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGT 1826192
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||| || || || |||||||||||
Sbjct 1826191 GAGGGTCTTAACGAAAATCTGCAT 1826168
>seq2
Length=2231275
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| ||| |||||| || |||||||| |||| | || | ||||| ||||||
Sbjct 1211837 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGC 1211896
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || | || |||||||| || || || | || ||||||||| ||| ||
Sbjct 1211897 TTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTG 1211956
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | | |||||||| | ||||| ||| | || ||||| ||||| |||
Sbjct 1211957 CTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTG 1212016
Query 48704 AGAGTTTTCACAAAAATCTGCATC 48727
|| || || || ||||||||||||
Sbjct 1212017 AGTGTCTTGACGAAAATCTGCATC 1212040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251102454019
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |