Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 8e-27
seq2 98.7 2e-16
>seq1
Length=4294417
Score = 132 bits (146), Expect = 8e-27
Identities = 188/262 (72%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| ||| || ||| | || |||||||| ||||| | |||||||| ||||
Sbjct 3176436 CGCTAAGCGTCACCGCAAGGTCT-TGCGTGATAACATTCAAGGTGTAACCAAGCCGGCTA 3176494
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||| || ||||||||||| ||||||||| |||||| ||| | ||||| | |
Sbjct 3176495 TTCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGCTTTGATTTATGAGCACA 3176554
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| |||| || |||||| | | || || | |||||||| | ||| || |
Sbjct 3176555 CCCGTATTGTTCTGCGTGGCTTCCTTCACAAGGTCATTCGTGATGCTTACACCTACACTG 3176614
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|| | || || | ||||| ||||| ||||| ||||||| || | || ||| | |
Sbjct 3176615 AGTATGCCAAGAGAAAGACCGTCACTGTGCTGGATGTCGTCTACGCTCTTAAGCGTAACG 3176674
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||| | | || ||||| ||
Sbjct 3176675 GCCGCACTCTCTACGGTTTCGG 3176696
Score = 100 bits (110), Expect = 4e-17
Identities = 181/262 (69%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| | |||| || || ||||||||||| | |||||||| ||||
Sbjct 1900389 CGCCAAGCGCCACCGCA-AGGTCTTGCGTGACAACATCCAAGGTGTAACCAAGCCCGCTA 1900447
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
| || ||||||||||||||||| || ||||||||| | || | | |||| || | |
Sbjct 1900448 TTCGCCGTCTGGCTCGTCGTGGAGGTGTCAAGCGTATTTCAGCCCTCATCTACGAGCACA 1900507
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| |||| || ||||| | | || ||| ||||| | | ||| || |
Sbjct 1900508 CCCGTATTGTTCTGCGTGGATTCCTTCACAAGGTCATCAGAGATGCGTACACCTACACTG 1900567
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|| |||| || |||||||| || || | | || |||| ||||| | ||||| | |
Sbjct 1900568 AGTACGCGAAGCGTAAGACAGTTACGGTCCTCGACGTCGTTTATGCCCTCAAACGCAATG 1900627
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||| | | || ||||| ||
Sbjct 1900628 GCCGAACCCTCTACGGTTTCGG 1900649
>seq2
Length=2231275
Score = 98.7 bits (108), Expect = 2e-16
Identities = 180/262 (69%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| |||| | ||| || || ||||||||||| | || |||||||||||
Sbjct 899287 GCCAAGCGTCACCGCAAAGTTCTGCGCGACAACATCCAAGGTGTAACTAAGCCAGCTATT 899346
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| ||||| |||||||| || |||||| | || | | | || ||| | |
Sbjct 899347 CGCCGTCTCGCTCGCCGTGGTGGTGTGAAGCGTATTTCAGCTCTTATTTACGAACATACC 899406
Query 16553 CGTGATGT--TTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
||| ||| | | || ||||| | | || |||| ||||| | |||||| |
Sbjct 899407 CGTATTGTCCTCCGTGGA--TTCCTGCACAAGGTCATCCGCGATGCGTATACCTATACGG 899464
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|| |||| || |||||||| || ||| | ||| |||| || || | || || | |
Sbjct 899465 AGTACGCGAAGCGTAAGACCGTGACCGTGCTTGATGTCGTTTACGCCCTCAAGCGCAATG 899524
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||| | |||| ||||| ||
Sbjct 899525 GCCGAACTCTTTACGGTTTCGG 899546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075182628167
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |