Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 132 8e-27 seq2 98.7 2e-16 >seq1 Length=4294417 Score = 132 bits (146), Expect = 8e-27 Identities = 188/262 (72%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| ||| || ||| | || |||||||| ||||| | |||||||| |||| Sbjct 3176436 CGCTAAGCGTCACCGCAAGGTCT-TGCGTGATAACATTCAAGGTGTAACCAAGCCGGCTA 3176494 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| || ||||||||||| ||||||||| |||||| ||| | ||||| | | Sbjct 3176495 TTCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGCTTTGATTTATGAGCACA 3176554 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| |||| || |||||| | | || || | |||||||| | ||| || | Sbjct 3176555 CCCGTATTGTTCTGCGTGGCTTCCTTCACAAGGTCATTCGTGATGCTTACACCTACACTG 3176614 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 || | || || | ||||| ||||| ||||| ||||||| || | || ||| | | Sbjct 3176615 AGTATGCCAAGAGAAAGACCGTCACTGTGCTGGATGTCGTCTACGCTCTTAAGCGTAACG 3176674 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||| | | || ||||| || Sbjct 3176675 GCCGCACTCTCTACGGTTTCGG 3176696 Score = 100 bits (110), Expect = 4e-17 Identities = 181/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| | |||| || || ||||||||||| | |||||||| |||| Sbjct 1900389 CGCCAAGCGCCACCGCA-AGGTCTTGCGTGACAACATCCAAGGTGTAACCAAGCCCGCTA 1900447 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||||||||||||||| || ||||||||| | || | | |||| || | | Sbjct 1900448 TTCGCCGTCTGGCTCGTCGTGGAGGTGTCAAGCGTATTTCAGCCCTCATCTACGAGCACA 1900507 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| |||| || ||||| | | || ||| ||||| | | ||| || | Sbjct 1900508 CCCGTATTGTTCTGCGTGGATTCCTTCACAAGGTCATCAGAGATGCGTACACCTACACTG 1900567 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 || |||| || |||||||| || || | | || |||| ||||| | ||||| | | Sbjct 1900568 AGTACGCGAAGCGTAAGACAGTTACGGTCCTCGACGTCGTTTATGCCCTCAAACGCAATG 1900627 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||| | | || ||||| || Sbjct 1900628 GCCGAACCCTCTACGGTTTCGG 1900649 >seq2 Length=2231275 Score = 98.7 bits (108), Expect = 2e-16 Identities = 180/262 (69%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| |||| | ||| || || ||||||||||| | || ||||||||||| Sbjct 899287 GCCAAGCGTCACCGCAAAGTTCTGCGCGACAACATCCAAGGTGTAACTAAGCCAGCTATT 899346 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| ||||| |||||||| || |||||| | || | | | || ||| | | Sbjct 899347 CGCCGTCTCGCTCGCCGTGGTGGTGTGAAGCGTATTTCAGCTCTTATTTACGAACATACC 899406 Query 16553 CGTGATGT--TTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| ||| | | || ||||| | | || |||| ||||| | |||||| | Sbjct 899407 CGTATTGTCCTCCGTGGA--TTCCTGCACAAGGTCATCCGCGATGCGTATACCTATACGG 899464 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 || |||| || |||||||| || ||| | ||| |||| || || | || || | | Sbjct 899465 AGTACGCGAAGCGTAAGACCGTGACCGTGCTTGATGTCGTTTACGCCCTCAAGCGCAATG 899524 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||| | |||| ||||| || Sbjct 899525 GCCGAACTCTTTACGGTTTCGG 899546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075182628167