Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 262 5e-65 seq2 131 2e-25 >seq1 Length=4294417 Score = 262 bits (290), Expect = 5e-65 Identities = 1347/2134 (63%), Gaps = 43/2134 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| || || ||||| | | |||||||| || ||||| || || || | Sbjct 3286024 GTGAATTGAATAGGGGCAGATGCAGCCTGAGTACGTAGGTAATACATACCTGTCTTCAAT 3285965 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||||| || || ||||| ||| ||||| | |||| || ||| Sbjct 3285964 CCCTTTGACCATCCATAGAAGTGCATCGACGTAAGTTTTCCAATGGTCGGTGCTTGCATA 3285905 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAA---GGCTCCCCTGTCTGCAGCCATTTTT 62171 || || || | | || || || || | ||||| | ||||| ||||| | Sbjct 3285904 TGAATGTTAAGACTCTGTGACTGGTCAATATATGGGGCTCGC---TCTGCTGCCATATCA 3285848 Query 62172 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 62231 || || | ||| || || ||||| | || || |||| | || || || || || Sbjct 3285847 ATAATAGCCTTCTGGCTGATCTCCCAGACCGTCTTGTAAAGCTGTTTCATGTCATCGGGG 3285788 Query 62232 AGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62288 | || | ||| ||||| || ||||| || || || | | ||| || || || ||| Sbjct 3285787 ATATTCCTGAGATTTTGAATTGAACCACCCTCAGCAATTAGGCGATTTTTCATGTCTTCA 3285728 Query 62289 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 62348 ||||| || | || || | || | | || | || || || | ||| || ||| Sbjct 3285727 TTCCACAAACCCATGTCAACTAGATCTTTCAAAAGGTAGGGGTTCACGATTTGGAACTCT 3285668 Query 62349 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTT 62408 || | | || | |||| |||| |||| |||||| || || | | |||||| | Sbjct 3285667 CCTGCAAGCACACGACGAGAATAAAGATTAGAGGTATAAGGCTCAAAACATTCATTAAAT 3285608 Query 62409 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62468 ||||| || || | || || ||||| ||||| || ||||| | || || | | | Sbjct 3285607 CCCAATATCTGTGACGTAGACGCAGTTGGCATCGGAGCCACAAGTAGTGAGTTACGCAAA 3285548 Query 62469 CCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 62528 || || | | ||| || ||||| ||||| ||||| | ||| | || || Sbjct 3285547 CCATACTTAGCCAATTTCTCCTTTAGTTCATCCCAGTTCCATAAATCAGTAGGCTCACGA 3285488 Query 62529 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGTATCGTA 62587 ||| | | ||| || || | | | ||| | || || ||||| Sbjct 3285487 CCCCATAGGTCAAATTGCAATAAACCCTTGGAAGCAGGGCTA-CCTTCGTAAGTTTCGTA 3285429 Query 62588 TGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62647 || || || | || | |||| ||| | ||| | ||| ||| |||||| ||||| Sbjct 3285428 AGGACCAAACTCCCTCGCCAATTCAACACTTGACTCGAGTGCGGCGTGATAAATTGTTTC 3285369 Query 62648 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAAT 62707 ||| |||| | || || | | | || || |||| ||||||||| ||| || Sbjct 3285368 GAATATCTGGATGTTCAGCTGTCGAGCCTCAGGGCTGTCAAATGGAAGGCGTAACTCAAA 3285309 Query 62708 AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 62767 || | ||| || || ||||||||||| | | || || | | || | || || Sbjct 3285308 GAAAGTGTCGGCCAACCCTTGAACACCTAGTGCAATTGGACGGTTCTTCATGTTTGAACG 3285249 Query 62768 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAT 62827 |||||| | |||||| || ||| ||| |||| | |||||||| | || Sbjct 3285248 CCTAGCTTCCTCCACAGGATAGTAGTTACGATCAATAACTCGGTTGAGATTCCGTGTGAT 3285189 Query 62828 TACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC---CCATC---------TAT 62875 | |||| ||||||| | ||||| | || ||| | | ||||| | Sbjct 3285188 GATTTTGGCCACATCATGAAGTTTTTGGAAGTCATACCAGATTCCATCACCAGTAGCTTC 3285129 Query 62876 TAC-AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 62934 ||| |||| | |||||| | ||| || ||||| || || || ||| | | || Sbjct 3285128 TACGAAACGCGG-CAAGGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACG 3285070 Query 62935 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGAT 62994 || | | ||||| |||||| || ||||||| || || | ||||| |||| Sbjct 3285069 AGTACTCAACGATCTCGCAGCAAAGGTTTGATGACTTGATCGTACCAAGGTTTTGCTGAT 3285010 Query 62995 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63054 || || ||| || ||||||||||| || || ||||| || ||||| ||| | |||| Sbjct 3285009 TAGATTTGCGGTTGCAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAG 3284950 Query 63055 ATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCT 63113 |||||||| | | ||| | | || |||| || || | ||| | || Sbjct 3284949 CCTCTATAATGGAATACCATA-GCTTCTGAGCTTTAATGGTGCGACGACCTCTGCCCTCC 3284891 Query 63114 CTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGA 63173 |||| ||| ||||| | | ||||||||| || || |||||| | || || Sbjct 3284890 TTTTCATATGTCGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGGG 3284831 Query 63174 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63233 || |||| |||||||| | | ||| || || | ||| ||||| || | |||||| | Sbjct 3284830 CACTCATTGGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAAG 3284771 Query 63234 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTC 63293 || ||||||||||| || | || | ||| | || | | || || || || |||| Sbjct 3284770 TCGGGAATCCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTC 3284711 Query 63294 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63353 || | ||| | | | | ||||||| ||||||||| || | || || || | Sbjct 3284710 TTGCGCACATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAG 3284651 Query 63354 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63413 | ||||| || ||||| || || || || | || | ||| || ||||| || || | | Sbjct 3284650 GCACCAGGTCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACGC 3284591 Query 63414 AACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCA 63473 ||||| ||||||| || || || ||||||| ||||| | ||| || || ||||| Sbjct 3284590 AACATGGGAATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTGGCA 3284531 Query 63474 CGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 63533 ||||| || ||| || || ||||| || || | || || || || || ||| Sbjct 3284530 CGAATGTTGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTCC 3284471 Query 63534 TTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCAT-GTTAAGTAGAAAACAGCT 63592 || | ||| ||||||||||| || || |||||||| |||| |||| || || ||| Sbjct 3284470 TTGAGCGTATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAG-AAGCAGGA 3284412 Query 63593 AGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCA 63652 ||||||||| | |||||| ||||| | | ||| ||| || || | || | Sbjct 3284411 AGACATTTGTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTA 3284352 Query 63653 TTTTTCAGAAAGTAGATT-GTACGTCTC---AATAGCTGAGTCTATATCCCATTGATGAA 63708 ||||| || | | ||| ||| || || || ||||| | |||||| ||| | Sbjct 3284351 TTTTTGTGACA-TCCATTGGTAGGTTTCGAGAACAGCTGGG---ATATCCTCGCCATGGA 3284296 Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768 | || || || || | ||||| |||||||||||||||||| | ||| || | Sbjct 3284295 TACCCACGGCAACTCTCATTATCATGTGCTGAGGTCTTTCCCATACCTTACCATTATACT 3284236 Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 63828 ||| || ||| ||| ||||| || || || || || | ||| | |||||||| | Sbjct 3284235 TCAGCAGGTATGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCTCGAT 3284176 Query 63829 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATA--TCCATGGTGAT 63886 | || | || ||||||| ||| |||| | | || || | | |||| | | | Sbjct 3284175 CATACACTATTGCCGAGTTTAGT---TCCTCAGCGTGCTTCACGACAGTGCCATAGAGCT 3284119 Query 63887 ACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63945 || || || || ||| ||| | ||| |||||||| || | | | ||| | Sbjct 3284118 CCTCCGATATCATTGGACTATGCCGGCGGTTTCGCGGATTAACGTATTCATAAAGATCTT 3284059 Query 63946 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 64005 ||| || || |||||| | ||||| || | |||||| || || || || || || | | Sbjct 3284058 TCATAACCTCGCTAAATTGCTTTTTCGTCTGCTTGTGCAGGTTCGAAACAGCGATACGAG 3283999 Query 64006 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 64065 | || |||| ||||||||| || || ||||| | || || ||||||| || | Sbjct 3283998 CTGCAAGAACGGCATAATCAGGGTGAACGGTAGTCATATAAGCAGCAGTTTCGGCAGCTA 3283939 Query 64066 GAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64099 | |||| | ||| || || | |||||| || || Sbjct 3283938 GGTTGTCTAGTTCAACTGTGGATACTCCGTTGTA 3283905 >seq2 Length=2231275 Score = 131 bits (144), Expect = 2e-25 Identities = 393/603 (65%), Gaps = 14/603 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 ||||| |||||| ||||| |||||| |||| || || || || || ||||| || Sbjct 2160491 CATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGC 2160550 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| || ||||| || || ||||| || ||||| ||||| || ||| |||||| Sbjct 2160551 CCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAG 2160610 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC---CGGCGCTGTCATGT 33480 | || || | || ||||| || | ||| | ||| || || || | ||||| | Sbjct 2160611 ACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTCTCTGTCGTTG 2160670 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG---CATCGTT-TCTATGGC 33536 ||||| ||||||| ||||||||| || | | || || ||| || || || Sbjct 2160671 ATCCAGCGAAGAGCCCAGTCGGCCTTC----TTGCGGATGGGCCCAATGTTATCGATTGC 2160726 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 |||||| | ||| || ||| || ||| |||| ||| ||||| || | || || Sbjct 2160727 ATTAAACAAATAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAATTAGTAGTGAGTA 2160786 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 | | || || || || || ||||| ||||| || || || || || ||||||||| Sbjct 2160787 CGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGCACTTAGCCTCGGG 2160846 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 ||||| || || || || || |||| ||||| || || || ||||| || Sbjct 2160847 GATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGATACCGTCGGATGC 2160906 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATT 33773 || ||||| || | ||| | || ||||| ||| || | | | | | | Sbjct 2160907 CGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCATTCATACGATGTTC 2160966 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 ||| || | | || || | || | || || | |||||||| |||||||| Sbjct 2160967 CCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAAAACTCGCCTCTGC 2161026 Query 33834 CTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGG 33893 |||||| || | |||||| || | || | ||| ||||| || ||||| |||| ||| Sbjct 2161027 CTTTTTGTAGTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATCACAAACCTATGTGG 2161086 Query 33894 ATT 33896 || Sbjct 2161087 GTT 2161089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947052050040