Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 306 1e-77 >seq1 Length=4294417 Score = 306 bits (338), Expect = 1e-77 Identities = 655/954 (69%), Gaps = 40/954 (4%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTA-TCTCGTATCAATGGTGA--TATTGTT 363447 ||||||| ||||| ||||| ||| ||||| | |||| |||||| | ||| | Sbjct 3284199 TTCGGATTCAAGACATTGGAGCGATCATACCTGCTGAAGTAT-AATGGTAAGGTATGG-- 3284255 Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||| | || ||||| ||| ||||| | ||||| | ||||||||| || |||| | Sbjct 3284256 GAAAGACCTCAGCACATGATAATGAGAGTTGCCGTGGGTATCCATGGCGAGGATATCCCA 3284315 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTG-CTCGTGTA-TTCACGCACGCCACGCCAA 363565 || | | ||||| || | | | || | || |||| || |||| |||| Sbjct 3284316 GCTGTTCTCGAAACCTACCAA--TGGATGTCACAAAAATACTTCATTCATGCCAGTCCAA 3284373 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | |||||||| ||||||| || ||||| |||||||| ||||| | ||| |||| Sbjct 3284374 CCCTCTACAATGCAGGAACTCCAAAGCCACAAATGTCTTCCTGCTTCTTGGTAACGATGA 3284433 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| ||| || || ||||||| ||| || || ||| | ||||| | ||||| |||| Sbjct 3284434 AGGATGATAGTATTGATGGTATCTATGATACGCTCAAGGAATGTGCCTTGATTTCAAAGA 3284493 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC- 363744 |||| || |||||||| | || ||||| ||||||| | | |||||| ||| Sbjct 3284494 ATGCCGGAGGAATTGGCCTCAGTATTCACAACATTCGTGCCACGGGCTCTTACAT-CGCT 3284552 Query 363745 GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || ||| || |||| | |||||||| |||||||| | ||||| | | |||||||| Sbjct 3284553 GGTACAAATGG-TACTTCCAATGGGCTTATTCCCATGTTGCGTGTCTACAATAATACTGC 3284611 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | || || ||||| ||||| ||||| || || ||||| |||||| | ||||| Sbjct 3284612 TCGCTATGTTGACCAAGGTGGTAACAAGCGACCTGGTGCCTTTGCGATGTATATTGAGCC 3284671 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAA--AAGAGGA 363920 |||| ||||||||||| |||| | || || || || || || ||||| Sbjct 3284672 GTGGCATGATGATATTTTTGATACCATTGATGTGCGCAAGAATCATGGTAAGGAAGAG-- 3284729 Query 363921 ATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGT 363980 ||| ||||| |||||| | ||| |||||||||| || | ||| |||||| |||| || Sbjct 3284730 ATT-CGTGCCCGTGATATTTTCGTTGCACTTTGGATTCCCGACTTATTTATGCAGCGGGT 3284788 Query 363981 GGAGGCAGGTAA---GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 | | || ||| | | ||| | || | || || | || || |||||||| || || Sbjct 3284789 GAA---AGATAATGGGGACTGGACTCTAATGTGTCCCAATGAGTGCCCAGGTCTCTCTGA 3284845 Query 364038 TGTATGGGGTGACGACTATGTTG--CTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 ||| | ||||| || | | || ||||||| | |||||| |||||| | | | Sbjct 3284846 TGTTTACGGTGAGGAGTTCGAAAAACTTTATACGACA--TATGAAAAGGAGGGCAGAGGT 3284903 Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155 ||| || ||| || ||||||||||||| | |||| || || | || | |||||| Sbjct 3284904 CGTCGCACCATTAAAGCTCAGAAGCTATGGTATTCCATTATAGAGGCTCAAACTGAGACT 3284963 Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215 ||||| || | |||| |||| || ||| | ||||||||||| || || ||||| ||||| Sbjct 3284964 GGAACCCCATTTATGCTGTATAAGGATGCCTGCAACCGCAAATCTAATCAGCAAAACCTT 3285023 Query 364216 GGTA----CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 |||| ||| ||| || ||||| || |||||| |||| ||| | | || || Sbjct 3285024 GGTACGATCAAGTCATCA----AACCTTTGCTGCGAGATCGTTGAGTACTCGTCCCCAGA 3285079 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT-GTAAAAG 364324 |||||||| || || || ||||| || | || ||| | |||||| ||| ||| Sbjct 3285080 GGAGACTGCAGTGTGCAATCTTGCCTCTCTGGC-CTTGCCGCGTTTCGTAGAAG 3285132 Score = 136 bits (150), Expect = 1e-26 Identities = 282/414 (68%), Gaps = 8/414 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 |||| || || || || || ||| ||||||||| ||||| ||| |||| ||| | || Sbjct 927490 TTCATACATGCGACACCGACGTTGTTCAATGCTGGTACTCGAAATGCACAAATGGCATCG 927431 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 |||| | || || | || || ||||| | ||||| || |||||||| | ||| | Sbjct 927430 TGCTATATTTTATGCCTTAAAGAGGATTCTGTAGAGGGAATATTTGACACTTTAAAGCAA 927371 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724 ||||| || || || ||| || |||| || ||||| || || ||| || || ||| Sbjct 927370 TGTGCGCTAATATCGAAGTATTCAGGGGGGATTGGATTGCAT--ATCTCGAACGTGCGTT 927313 Query 363725 CACAGAACAGTTACAT-TCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCT 363782 || | ||| | | || | || || || || |||| | ||| | ||||||||||| Sbjct 927312 CA--GTACATTCATATATTGCTGGTACTGGAGGATTCAGCGGTGGCGTTGTTCCCATGCT 927255 Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGC 363842 ||| ||||| ||||| |||| | | | || |||||||||| ||||| ||| || Sbjct 927254 GCGTATGTTTAACAATGCTGCACGATTTATTGATCAGGGTGGAGCTAAGCGTCCAGGAGC 927195 Query 363843 GTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA 363902 || |||| | || || ||||| ||||| || || ||| | || || | || Sbjct 927194 ATTATCTATCACCTTGGAACCGTGGCATGCAGATATATTGGACTTTTTAGATCTTAGAAA 927135 Query 363903 AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGT 363956 ||| || ||||| || | ||||| |||||| | ||||||||| | ||||| Sbjct 927134 AAATCATGGTAAAGAAGAGCTCCGTGCTCGTGATTTATTCTATGCATTATGGGT 927081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353282714858