Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 seq2 122 8e-23 >seq1 Length=4294417 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | ||| |||||||| ||||||||||| || Sbjct 1826394 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1826335 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| | || |||||||| || ||||| ||| Sbjct 1826334 AGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGG 1826275 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | ||| || | |||||| | Sbjct 1826274 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACC 1826215 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || || || |||||||||||||| Sbjct 1826214 TCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||| || | ||| | || |||||||| |||||||||||||| | Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| || ||||| || ||| | || || ||||||||||| || || Sbjct 3810449 AAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGA 3810390 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || ||| | | || | |||||| | ||||| | Sbjct 3810389 ATACCCTCCTTGTC-CTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCAC 3810331 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||||| ||| || || || |||||||| Sbjct 3810330 CTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283 >seq2 Length=2231275 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||||| || |||||||| || Sbjct 1211813 CCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1211872 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| |||||||| ||||| || ||| Sbjct 1211873 AGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGG 1211932 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | ||||| | |||||| | Sbjct 1211933 ATACCCTCCTTGTCCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACC 1211992 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || || || |||||||||||||| Sbjct 1211993 TCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012687896960