Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 >seq1 Length=4294417 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| |||||| |||||| ||||| |||||||||| Sbjct 3810511 TACCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAG 3810452 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||||| ||| | || || | ||| || || || || || | || || || || | | Sbjct 3810451 ACAAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTG 3810392 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCA 38267 | | || || |||||| ||| ||| ||||||||| | || |||||| | || || Sbjct 3810391 GAATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATC-CGACGACTCC 3810333 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || || || || || || ||||| || |||||||| Sbjct 3810332 ACCTCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | |||||||| || | ||||| ||| ||||| || |||||||| ||||| Sbjct 3810737 CCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAG 3810678 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | | |||| || | || || || ||||| || | || |||||||| | || Sbjct 3810677 AGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGA 3810618 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| || ||| ||| || ||||||||| | | || || | || ||| Sbjct 3810617 ATACCTTCCTTATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACT 3810558 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || ||||| | |||||| |||||||||||||| Sbjct 3810557 TCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947122438789