Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq2 122 7e-23 >seq1 Length=4294417 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||||||||| || ||| |||| | || ||||| | | Sbjct 3810283 ATGCAGATCTTTGTGAAGACTTTAACCGGCAAGACGATCACCTTGGAGGTGGAGTCGTCG 3810342 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||| ||||| |||||||||||||||||||| || || Sbjct 3810343 GATACTATCGATAATGTGAAGTCAAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAG 3810402 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || || | |||||| ||| || | || ||||||||| Sbjct 3810403 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAGGATGGCCGTACTTTGTCTGATTACAAC 3810462 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || ||||| | ||| | |||||||| | || || ||| Sbjct 3810463 ATTCAGAAGGAGTCCACTCTGCATCTCGTTTTGCGCCTCCGTGGTGGT 3810510 Score = 122 bits (134), Expect = 7e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| ||||| ||||| || | || ||||| || | || ||||| || || | Sbjct 1826164 AAAAATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGTC 1826223 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | | || || | ||| || |||| || || || ||||||||||| || || || || Sbjct 1826224 CTCGGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGA 1826283 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||| ||| | || || ||||| || ||| | |||||| |||||| | || || || Sbjct 1826284 TCAACAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTA 1826343 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| || || |||||| | || | || |||| |||| || ||| Sbjct 1826344 CAACATTCAGAAGGAGTCCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGT 1826395 Score = 87.8 bits (96), Expect = 2e-12 Identities = 199/299 (67%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 130105 TCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTC 130164 |||| | ||| |||| || | |||||||| |||| ||| || || | || || Sbjct 3284701 TCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGGT 3284642 Query 130165 CGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCC 130221 || ||| || ||||||||||| | ||| | | ||| |||||||| |||||||| | Sbjct 3284641 CGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACGCAACATGGGA 3284582 Query 130222 TCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTA 130281 | || |||| || || ||||| | | ||| || ||| || |||| ||| Sbjct 3284581 ATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCCCGTGGCACGAATGTTG 3284522 Query 130282 TGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTT 130341 |||| || || || || || ||| || ||||| ||||| || || || ||||| Sbjct 3284521 TGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTCCTTGAGCGTA 3284462 Query 130342 TCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGAGGCCAATTG 130400 ||||| || ||| | ||||| || || || || ||| | ||| || || | || ||| Sbjct 3284461 TCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTTG 3284403 >seq2 Length=2231275 Score = 122 bits (134), Expect = 7e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| ||||| || || || | || ||||| || | || ||||| || || || Sbjct 1212041 AGATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCT 1211982 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | |||||| | ||| || | || || ||||| |||||||||||||| || || || | Sbjct 1211981 CGGATACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACC 1211922 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 |||| ||| | || || ||||| || ||| | |||||| |||||| |||| || |||| Sbjct 1211921 AACAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACA 1211862 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || |||||| Sbjct 1211861 ACATCCAGAAGGAGTCCACC 1211842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727902806735