Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 9e-20
>seq1
Length=4294417
Score = 113 bits (124), Expect = 9e-20
Identities = 654/1033 (63%), Gaps = 49/1033 (5%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| ||||| |||| || ||||| | || || |||| ||||||||||| |||
Sbjct 3759318 GGTGAGGACTTGTGTAACTGCGAGTTCTCCTTGGCTTACGGTGCTAAGATTCTGCTTAAC 3759259
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | || | |||||| | || ||||||||| |||||||| || ||
Sbjct 3759258 CGCACTCAGTTCCGTCTTAAGCGTAACCGTCGTTATGGTCTCTGTGGTCCCAACGGTGCT 3759199
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|||||| |||| | ||||| || || || |||||||| | ||||| |||| | | ||
Sbjct 3759198 GGTAAGTCCACTTTGATGCGTGCTATCGCTAACGGTCAAGTTGAAGG-CTTCCCATCCCA 3759140
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583
|||| | | ||| || || || ||||| || ||||| ||| | || | |
Sbjct 3759139 GGATGAGCTTAAGACCGTCTACGTCGAGCATGATATCGATGGTACTCATGCTGACACTAA 3759080
Query 279584 TGTGTTCGACTTCCTAACGTC--TGACA-ATCAGGTTATGGAA----ATCAGCTCTCCTG 279636
||| | || | ||||| || || | ||| | ||| || | | |||
Sbjct 3759079 TGTTGTTGAGT-----ACGTCATTGCCACTTGCGGTGA--GAATGTTGTCGGTGATACTG 3759027
Query 279637 AGGAAATCATCCAGAAAC------TGGAGGCCAATGGTTT---TGATGAAAGAATGCGTA 279687
|| | | | |||| ||||| | ||||| |||||| | | || |
Sbjct 3759026 AG---ACTGTTCGTAAACATCTTATGGAGTTC---GGTTTCACTGATGAGATGACCCGCA 3758973
Query 279688 ATCTGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCA 279747
||||| | || |||| ||||||||||||||||||||||||||| | |||
Sbjct 3758972 ---TGCCAATCACGTCGTTGTCTGGTGGTTGGAAGATGAAGCTGGCCCTCGCCACAGCCG 3758916
Query 279748 TTCTACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCA 279807
| || | || || |||| || ||||||||||| ||||| ||| |||| ||| ||
Sbjct 3758915 TGCTCCGTAAGGCTGACATCCTTCTTCTTGATGAGCCCACCAATCACTTGGATACCGTCA 3758856
Query 279808 ACGTAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCT 279867
| || || ||||||| | |||||| | | ||| | | | | || | ||||| |
Sbjct 3758855 ATGTTGCGTGGCTAGAGAACTACCTCATGA-CCTGTGG--TATCACCTCAATTATTGTTT 3758799
Query 279868 CTCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATC 279927
| ||||||||||| ||||| || |||||| ||||||| |||| ||||
Sbjct 3758798 CGCACGACTCTGGTTTCCTTGACAAGGTGTGCCAGTACATCATTAACTACGAGC---GCT 3758742
Query 279928 TGAAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGG 279987
| |||||| |||| ||| || || || ||| ||||| ||| ||| ||
Sbjct 3758741 TCAAGCTCCACAAGTACAAGGGTAATTTGACTGAGTTCGTCCACAAGTATCCTCCTGCCA 3758682
Query 279988 CCGCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTC 280047
| |||| || || | | | | | | ||||| ||||| || || |
Sbjct 3758681 AGTCTTACTTCGAGCTTGGTGCTTCGGATGTTCACTTCAAGTTCCCCGAGCCTGGTTTCC 3758622
Query 280048 TGGAGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTT 280107
| ||||| | | | || | || ||| | ||| | || ||| ||||| |
Sbjct 3758621 TCGAGGGTGTTAAGACTAAACAGAAGGCTATCGTCAAGGTGTCTGACGTTTCCTTCCAGT 3758562
Query 280108 ATCCCAATGGCCCCAACA-TCTTCAG--CAGTGTCAACTC---GCAGGTTTCTATGAACT 280161
| || ||| || || | ||| || | || ||| ||||||||| | |
Sbjct 3758561 ACCC---TGGAACCTCCAGACCCCAGATCACTAACATCTCCTTCCAGGTTTCTCTTTCGT 3758505
Query 280162 CACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGA 280221
| || |||| ||||||||| || || ||||| ||||| ||||| ||||| || || || |
Sbjct 3758504 CGCGTATTGCTGTCATTGGTCCTAACGGTGCTGGTAAATCTACTCTAATTAACGTTCTTA 3758445
Query 280222 CTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTT 280281
| |||||| | |||| || || | | |||| ||| || || || |
Sbjct 3758444 CAGGCGAGCTTTTGCCCACCACCGGTGAAGTCTATACGCATGAGAACTGCCGTATCGCCT 3758385
Query 280282 ACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAAT 280341
| ||| |||||||| ||| ||||||||| ||||||| |||| |||||| | | |
Sbjct 3758384 ATGTCAAACAGCACGCGTTCGCCCACATCGATCACCACCTCGACAAGACTCCAAGTGAGT 3758325
Query 280342 ACATTCAGTGGCG 280354
|||||||||||||
Sbjct 3758324 ACATTCAGTGGCG 3758312
Score = 86.0 bits (94), Expect = 1e-11
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220
|| ||||| | |||| | || || || ||||| || ||||||||||| ||||| | ||
Sbjct 2948776 TCGCGGATCGCTGTCCTAGGTCCGAACGGTGCAGGAAAGTCTACCCTCATCAAGCTTTTG 2948717
Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
||||| ||| | | || || || || ||| ||||||||| ||| | || || |
Sbjct 2948716 ACTGGGGAG-CTTATTCCTACAGAAGGAAATGTTGAGAAGCATCCTAACCTCCGTATCGG 2948658
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
|| | || |||||||| |||| || | ||| ||| ||| | ||| || || ||
Sbjct 2948657 ATATATTGCCCAGCACGCCCTCCAGCATGTTGAGCTGCACAAGGAAAAGACCCCCAATCA 2948598
Query 280340 ATACATTCAGTGGCGCTAT 280358
||| ||||||||||| |||
Sbjct 2948597 ATATATTCAGTGGCGTTAT 2948579
Score = 86.0 bits (94), Expect = 1e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 280678 TGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGA 280737
||||||| || ||||||| || ||||| || || || |||||||| || || ||||
Sbjct 3757943 TGGGTCTTGAGGCCGAGTTGGTCACCCACTCCCGTATCCGTGGTCTTTCCGGTGGTCAGA 3757884
Query 280738 AGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACG 280797
||||||| ||||| | | || | ||||| | || ||| | |||||||| || |
Sbjct 3757883 AGGTCAAGCTTGTGCTTGCTGCTTGTACTTGGCAGCGTCCCCACATCATCGTTCTTGATG 3757824
Query 280798 AGCCTACCAACTATCTGGACCGCGA 280822
||||||| ||||| || ||||| ||
Sbjct 3757823 AGCCTACTAACTACCTTGACCGTGA 3757799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836549785979
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |