Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 113 9e-20 >seq1 Length=4294417 Score = 113 bits (124), Expect = 9e-20 Identities = 654/1033 (63%), Gaps = 49/1033 (5%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| || ||||| | || || |||| ||||||||||| ||| Sbjct 3759318 GGTGAGGACTTGTGTAACTGCGAGTTCTCCTTGGCTTACGGTGCTAAGATTCTGCTTAAC 3759259 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | || | |||||| | || ||||||||| |||||||| || || Sbjct 3759258 CGCACTCAGTTCCGTCTTAAGCGTAACCGTCGTTATGGTCTCTGTGGTCCCAACGGTGCT 3759199 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 |||||| |||| | ||||| || || || |||||||| | ||||| |||| | | || Sbjct 3759198 GGTAAGTCCACTTTGATGCGTGCTATCGCTAACGGTCAAGTTGAAGG-CTTCCCATCCCA 3759140 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCAC 279583 |||| | | ||| || || || ||||| || ||||| ||| | || | | Sbjct 3759139 GGATGAGCTTAAGACCGTCTACGTCGAGCATGATATCGATGGTACTCATGCTGACACTAA 3759080 Query 279584 TGTGTTCGACTTCCTAACGTC--TGACA-ATCAGGTTATGGAA----ATCAGCTCTCCTG 279636 ||| | || | ||||| || || | ||| | ||| || | | ||| Sbjct 3759079 TGTTGTTGAGT-----ACGTCATTGCCACTTGCGGTGA--GAATGTTGTCGGTGATACTG 3759027 Query 279637 AGGAAATCATCCAGAAAC------TGGAGGCCAATGGTTT---TGATGAAAGAATGCGTA 279687 || | | | |||| ||||| | ||||| |||||| | | || | Sbjct 3759026 AG---ACTGTTCGTAAACATCTTATGGAGTTC---GGTTTCACTGATGAGATGACCCGCA 3758973 Query 279688 ATCTGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCA 279747 ||||| | || |||| ||||||||||||||||||||||||||| | ||| Sbjct 3758972 ---TGCCAATCACGTCGTTGTCTGGTGGTTGGAAGATGAAGCTGGCCCTCGCCACAGCCG 3758916 Query 279748 TTCTACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCA 279807 | || | || || |||| || ||||||||||| ||||| ||| |||| ||| || Sbjct 3758915 TGCTCCGTAAGGCTGACATCCTTCTTCTTGATGAGCCCACCAATCACTTGGATACCGTCA 3758856 Query 279808 ACGTAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCT 279867 | || || ||||||| | |||||| | | ||| | | | | || | ||||| | Sbjct 3758855 ATGTTGCGTGGCTAGAGAACTACCTCATGA-CCTGTGG--TATCACCTCAATTATTGTTT 3758799 Query 279868 CTCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATC 279927 | ||||||||||| ||||| || |||||| ||||||| |||| |||| Sbjct 3758798 CGCACGACTCTGGTTTCCTTGACAAGGTGTGCCAGTACATCATTAACTACGAGC---GCT 3758742 Query 279928 TGAAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGG 279987 | |||||| |||| ||| || || || ||| ||||| ||| ||| || Sbjct 3758741 TCAAGCTCCACAAGTACAAGGGTAATTTGACTGAGTTCGTCCACAAGTATCCTCCTGCCA 3758682 Query 279988 CCGCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTC 280047 | |||| || || | | | | | | ||||| ||||| || || | Sbjct 3758681 AGTCTTACTTCGAGCTTGGTGCTTCGGATGTTCACTTCAAGTTCCCCGAGCCTGGTTTCC 3758622 Query 280048 TGGAGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTT 280107 | ||||| | | | || | || ||| | ||| | || ||| ||||| | Sbjct 3758621 TCGAGGGTGTTAAGACTAAACAGAAGGCTATCGTCAAGGTGTCTGACGTTTCCTTCCAGT 3758562 Query 280108 ATCCCAATGGCCCCAACA-TCTTCAG--CAGTGTCAACTC---GCAGGTTTCTATGAACT 280161 | || ||| || || | ||| || | || ||| ||||||||| | | Sbjct 3758561 ACCC---TGGAACCTCCAGACCCCAGATCACTAACATCTCCTTCCAGGTTTCTCTTTCGT 3758505 Query 280162 CACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGA 280221 | || |||| ||||||||| || || ||||| ||||| ||||| ||||| || || || | Sbjct 3758504 CGCGTATTGCTGTCATTGGTCCTAACGGTGCTGGTAAATCTACTCTAATTAACGTTCTTA 3758445 Query 280222 CTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTT 280281 | |||||| | |||| || || | | |||| ||| || || || | Sbjct 3758444 CAGGCGAGCTTTTGCCCACCACCGGTGAAGTCTATACGCATGAGAACTGCCGTATCGCCT 3758385 Query 280282 ACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAAT 280341 | ||| |||||||| ||| ||||||||| ||||||| |||| |||||| | | | Sbjct 3758384 ATGTCAAACAGCACGCGTTCGCCCACATCGATCACCACCTCGACAAGACTCCAAGTGAGT 3758325 Query 280342 ACATTCAGTGGCG 280354 ||||||||||||| Sbjct 3758324 ACATTCAGTGGCG 3758312 Score = 86.0 bits (94), Expect = 1e-11 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || ||||| | |||| | || || || ||||| || ||||||||||| ||||| | || Sbjct 2948776 TCGCGGATCGCTGTCCTAGGTCCGAACGGTGCAGGAAAGTCTACCCTCATCAAGCTTTTG 2948717 Query 280221 ACTGGCGAGACCCAGGCC-ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | | || || || || ||| ||||||||| ||| | || || | Sbjct 2948716 ACTGGGGAG-CTTATTCCTACAGAAGGAAATGTTGAGAAGCATCCTAACCTCCGTATCGG 2948658 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 || | || |||||||| |||| || | ||| ||| ||| | ||| || || || Sbjct 2948657 ATATATTGCCCAGCACGCCCTCCAGCATGTTGAGCTGCACAAGGAAAAGACCCCCAATCA 2948598 Query 280340 ATACATTCAGTGGCGCTAT 280358 ||| ||||||||||| ||| Sbjct 2948597 ATATATTCAGTGGCGTTAT 2948579 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 280678 TGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGA 280737 ||||||| || ||||||| || ||||| || || || |||||||| || || |||| Sbjct 3757943 TGGGTCTTGAGGCCGAGTTGGTCACCCACTCCCGTATCCGTGGTCTTTCCGGTGGTCAGA 3757884 Query 280738 AGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACG 280797 ||||||| ||||| | | || | ||||| | || ||| | |||||||| || | Sbjct 3757883 AGGTCAAGCTTGTGCTTGCTGCTTGTACTTGGCAGCGTCCCCACATCATCGTTCTTGATG 3757824 Query 280798 AGCCTACCAACTATCTGGACCGCGA 280822 ||||||| ||||| || ||||| || Sbjct 3757823 AGCCTACTAACTACCTTGACCGTGA 3757799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836549785979