Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 2e-33
seq2 152 9e-32
>seq1
Length=4294417
Score = 158 bits (174), Expect = 2e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306
||||| || | ||| |||||||| || || ||||| || || || ||||| ||||| ||
Sbjct 3810725 CGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCG 3810666
Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366
|| || | |||||| || || || || | || ||||| || || ||||| ||||||||
Sbjct 3810665 TCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTA 3810606
Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426
|| |||||||| | ||| || || |||||||| | || || ||||| | |||||
Sbjct 3810605 TCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATC 3810546
Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||||||||| || ||||||||||||||
Sbjct 3810545 GTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| || | ||| || |||||||| || || ||||| || || ||
Sbjct 1826394 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1826335
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | | ||||| || || ||
Sbjct 1826334 AGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGG 1826275
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | |||||| || || ||||| | || || ||
Sbjct 1826274 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACC 1826215
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | ||| ||||| || |||||||||||||| ||||| |||||||||
Sbjct 1826214 TCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATT 1826167
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || |||||||| || | || || |||||||| || || ||||| ||||| ||
Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | ||||| || ||||| || | || || ||||| ||||||
Sbjct 3810449 AAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGA 3810390
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||||| ||| || ||||| || || | || || ||
Sbjct 3810389 ATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACC 3810330
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||||||||| || || || || | ||||| || || |||||||||
Sbjct 3810329 TCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATT 3810282
Score = 96.9 bits (106), Expect = 6e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 224510 GACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCAC 224569
|| || ||||||||| |||| || |||||||| || | ||| | |||||| | ||||||
Sbjct 3757796 GAGTCACGGTCAAGGTAGTTAGTAGGCTCATCAAGAACGATGATGTGGGGACGCTGCCA- 3757854
Query 224570 AGGGCT-GCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628
|| | ||| ||| ||| ||||| ||||||||||| || || || || ||||| || ||
Sbjct 3757855 AGTACAAGCAGCAAGCACAAGCTTGACCTTCTGACCACCGGAAAGACCACGGATACGGGA 3757914
Query 224629 GTGAGTCGTGAATTCGGGGTCAAGACC 224655
||| || || |||| ||||||||
Sbjct 3757915 GTGGGTGACCAACTCGGCCTCAAGACC 3757941
>seq2
Length=2231275
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | ||| || |||||||| || |||||||| || || |||
Sbjct 1211813 CCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1211872
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | | |||||||| || ||
Sbjct 1211873 AGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGG 1211932
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| ||| || |||||||| || | || || ||
Sbjct 1211933 ATACCCTCCTTGTCCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACC 1211992
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| ||||| || |||||||| ||||||||||| ||||||||
Sbjct 1211993 TCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622181114680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |