Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 138 2e-27 >seq2 Length=2231275 Score = 138 bits (152), Expect = 2e-27 Identities = 534/822 (65%), Gaps = 24/822 (3%) Strand=Plus/Minus Query 42336 TGGACCGCCGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAG 42395 ||||||||||||||||| ||||||| ||||||| || |||||| || || ||| Sbjct 2161011 TGGACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCACGACTGGGAA-CATCGTATGAA 2160953 Query 42396 AAC-GA--AAAGTT-TTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCAT 42451 | || || ||| |||| | | || ||||| ||||| || || ||||| || Sbjct 2160952 TGCTGATGAACGTTATTTCATTTCCCGTGTGCTTGCCTTTTTCGCGGCATCCGACGGTAT 2160893 Query 42452 AGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTG 42511 ||||| || ||| ||| | |||| | || || ||| | ||||| || Sbjct 2160892 CGTCAACGAAAACTTGGTACAAAATTTCAGTGACGACGTCCAGATCCCCGAGGCTAAGTG 2160833 Query 42512 CTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCT 42571 ||| || |||||||||||| || ||||| | ||||||||| |||| | ||| | Sbjct 2160832 CTTTTATGGCTTCCAGATAATGATTGAGAATATCCACTCTGAGACGTACTCACTACTAAT 2160773 Query 42572 CAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGAT 42631 | || || || ||||||| || ||| |||| || || || || | || Sbjct 2160772 TGATACCTATATTAAGGATCCCAAAGAAGCTAATTATTTGTTTAATGCAATCGATAACAT 2160713 Query 42632 --GCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT---CGAGAGTCCCGAC 42686 | || |||| |||||||| |||||||| || |||||| ||| || ||| Sbjct 2160712 TGGGCC--CATCCGCAAGAAGGCCGACTGGGCTCTTCGCTGGATCAACGACAG---AGAC 2160658 Query 42687 GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGC 42746 | || || | ||| | || || || ||| | ||| | |||||| |||||||| || Sbjct 2160657 GTTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGGGCGTCTTCTTCAGTGGG 2160598 Query 42747 GCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTC 42805 | ||||| ||||| |||||||||||| | | | ||| ||||| || || || ||||| Sbjct 2160597 TCTTTCGCATCCATTTTCTGGCTCAAG-AAACGTGGTCTCATGCCTGGGCTGACGTTCTC 2160539 Query 42806 GAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865 || || |||||| | || ||||| |||| | || ||||| ||| || ||||| Sbjct 2160538 TAATGAGCTCATCTCACGAGATGAGGGTATGCACACCGATTTTGCATGCGTCTTGTTC-- 2160481 Query 42866 GAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGT 42925 |||| |||| || ||||||||| | || | ||| || || ||||| || Sbjct 2160480 -GGCCATCTCACTAACCGTCCCTCGAAGAGGATTGTTGAGCGCATTATAACTGAGGCTGT 2160422 Query 42926 GGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCA 42985 || || ||| || ||| | | |||| || || || || | || ||||| Sbjct 2160421 CGATATTGAGCTCGACTTCTGGGCTGATGCGCTTCCTGTTTCGTTGCTTGGTATGAATGC 2160362 Query 42986 CGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTC 43044 | |||||| |||| || || | ||| || || | | | || ||| | | ||| Sbjct 2160361 TAAGCTCATGGATCAGTATATTCAATTCGTTGCTGATCGTTTGCTCGTGGC-CCTCGGTA 2160303 Query 43045 TC-AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAG 43103 | || | | ||||| || ||| |||||||| ||||| || || || | | Sbjct 2160302 ACGAGAAG-GTGTACAAGGTTACGAACCCTTTCGACTTCATGGAAAATATTTCTCTCGCT 2160244 Query 43104 GGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 || ||||| ||||| |||||||| || ||| | || || ||| Sbjct 2160243 GGAAAGACAAACTTCTTCGAGAAACGGGTCTCTGATTATCAG 2160202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338975719440