Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2 127 5e-24 seq1 125 2e-23 >seq2 Length=2231275 Score = 127 bits (140), Expect = 5e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214 ||||||||||| | |||||| |||| ||||| ||||||| ||||||||| | || | Sbjct 2160372 GGTATGAATGCTAAGCTCATGGATCAGTATATTCAATTCGTTGCTGATCGTTTGCTCGTG 2160313 Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274 || |||||| | ||||| |||||||| | ||| || |||| ||| |||||| ||| Sbjct 2160312 GCCCTCGGTAACGAGAAGGTGTACAAGGTTACGAACCCTTTCGACTTCATGGAAAATATT 2160253 Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || |||| |||||||| ||||||||||| || || ||| || ||||| Sbjct 2160252 TCTCTCGCTGGAAAGACAAACTTCTTCGAGAAACGGGTCTCTGATTATCA 2160203 Score = 120 bits (132), Expect = 7e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| |||| ||| || || ||||| || ||||| | | Sbjct 1211813 CCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1211872 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || ||||| |||||||||| ||||||||| | ||| Sbjct 1211873 AGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGG 1211932 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || ||||| || || ||| || || || || || | ||| || || || Sbjct 1211933 ATACCCTCCTTGTCCTGAATCTT-GCTCTTAACATTGTCGATGGTATCCGAGGACTCAAC 1211991 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || || || ||||||||||| |||||||| Sbjct 1211992 CTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039 >seq1 Length=4294417 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || || |||| |||| ||| || |||||||| ||||| | ||| || | ||||| || Sbjct 3810719 ACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTCA 3810660 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384 | || || || || ||||||| ||||||||| | || || ||||| |||||||| Sbjct 3810659 AGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGA 3810600 Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444 || || | ||||| || || || | || || || |||||||| ||||||||||| Sbjct 3810599 ATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGTCTTT 3810540 Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||||||||||||| Sbjct 3810539 CCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | |||||||| | ||| || || || || || || || | Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || | ||| || || ||||| |||| ||||| || | ||| Sbjct 3810449 AAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGA 3810390 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || | ||||| || || |||| ||| ||| || || Sbjct 3810389 ATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACC 3810330 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | ||||||||||| ||||| | |||||| || || ||||||||| Sbjct 3810329 TCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATT 3810282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654112827882