Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 5e-24
seq1 125 2e-23
>seq2
Length=2231275
Score = 127 bits (140), Expect = 5e-24
Identities = 130/170 (76%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 269155 GGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACG 269214
||||||||||| | |||||| |||| ||||| ||||||| ||||||||| | || |
Sbjct 2160372 GGTATGAATGCTAAGCTCATGGATCAGTATATTCAATTCGTTGCTGATCGTTTGCTCGTG 2160313
Query 269215 GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATT 269274
|| |||||| | ||||| |||||||| | ||| || |||| ||| |||||| |||
Sbjct 2160312 GCCCTCGGTAACGAGAAGGTGTACAAGGTTACGAACCCTTTCGACTTCATGGAAAATATT 2160253
Query 269275 TCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324
|| |||| |||||||| ||||||||||| || || ||| || |||||
Sbjct 2160252 TCTCTCGCTGGAAAGACAAACTTCTTCGAGAAACGGGTCTCTGATTATCA 2160203
Score = 120 bits (132), Expect = 7e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| ||||| |||| ||| || || ||||| || ||||| | |
Sbjct 1211813 CCACCACGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 1211872
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || ||||| |||||||||| ||||||||| | |||
Sbjct 1211873 AGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGG 1211932
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || ||||| || || ||| || || || || || | ||| || || ||
Sbjct 1211933 ATACCCTCCTTGTCCTGAATCTT-GCTCTTAACATTGTCGATGGTATCCGAGGACTCAAC 1211991
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || || || ||||||||||| ||||||||
Sbjct 1211992 CTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTGCAT 1212039
>seq1
Length=4294417
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| || |||| |||| ||| || |||||||| ||||| | ||| || | ||||| ||
Sbjct 3810719 ACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTCA 3810660
Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGG 288384
| || || || || ||||||| ||||||||| | || || ||||| ||||||||
Sbjct 3810659 AGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGA 3810600
Query 288385 ATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTC 288444
|| || | ||||| || || || | || || || |||||||| |||||||||||
Sbjct 3810599 ATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGTCTTT 3810540
Query 288445 CCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || ||||||||||||||
Sbjct 3810539 CCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Score = 96.9 bits (106), Expect = 8e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | | |||||||| | ||| || || || || || || || |
Sbjct 3810509 CCACCACGGAGGCGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGAC 3810450
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || || || || || | ||| || || ||||| |||| ||||| || | |||
Sbjct 3810449 AAAGTACGGCCATCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGA 3810390
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || || | ||||| || || |||| ||| ||| || ||
Sbjct 3810389 ATACCCTCCTTGTCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACC 3810330
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| | ||||||||||| ||||| | |||||| || || |||||||||
Sbjct 3810329 TCCAAGGTGATCGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATT 3810282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654112827882
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |