Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 6e-25
>seq1
Length=4294417
Score = 129 bits (142), Expect = 6e-25
Identities = 161/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
||||| || | ||||| ||| |||||| ||||| |||||||||| || ||| || |
Sbjct 3810497 CGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCA 3810438
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || || |||||||||||||| || | |||||||||||| | ||| | | |||||||
Sbjct 3810437 TCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTG 3810378
Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||| | |||| || | | | | || || ||| ||||| || | |||||
Sbjct 3810377 TCC-TGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGAT 3810319
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTT 42210
|| ||||| |||| ||||| |||||||| |||||||
Sbjct 3810318 CGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281
Score = 89.7 bits (98), Expect = 6e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||| | || | ||| |||||| ||||| ||||| |||| ||||| || |
Sbjct 1826383 ACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCC 1826324
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || ||||||||||| ||||| || | ||||| || || | || | | ||||||
Sbjct 1826323 ATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTT 1826264
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| || |||| | | | ||||| || || || || | || ||
Sbjct 1826263 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAAT 1826204
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
||| || ||||| || ||||| || || || ||||||||
Sbjct 1826203 GGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || | ||||||||| || | || | ||| ||||| || |||||||| ||||
Sbjct 3810737 CCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAG 3810678
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||||| |||| || |||||||||||||| || || | |||||| || || | ||
Sbjct 3810677 AGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGA 3810618
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||| ||| ||| | || | || | | | | ||||| || |||||
Sbjct 3810617 ATACCTTCCTTATCC-TGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCAC 3810559
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| ||||| || || ||||| || || || || || || |||||
Sbjct 3810558 TTCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212670986960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |