Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 7e-18
>seq1
Length=4294417
Score = 105 bits (116), Expect = 7e-18
Identities = 156/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|| ||||| | || || || || |||||||||||||| | | || || | || |||
Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|| ||||| || || |||| | ||||||||||| || ||||| || || || || ||
Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCT 64412
|| ||| ||| ||| || | ||||| || || ||||| || | || | ||||
Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATC--CGACGACTCCACCTCCAAGGTGATCGTCT 3810314
Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAA 64451
||||||| ||||| || || || || ||||||| |||||
Sbjct 3810313 TGCCGGTTAAAGTCTTCACAAAGATCTGCATTTGAATAA 3810275
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|| || |||| ||| ||||| || || || ||||| || | || || | |||| |||
Sbjct 3810719 ACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTCA 3810660
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
|||||||| || ||| | || | ||||| || || |||||||| ||||| || || ||
Sbjct 3810659 AGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGA 3810600
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| ||| || | || || | |||||||| | ||| | |||||
Sbjct 3810599 ATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGTCTTT 3810540
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || | ||||| ||||| || |||||
Sbjct 3810539 CCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| || || | || || || || ||||||||||| || |
Sbjct 1826395 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 1826336
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | || || |||||||| ||||| |||| | ||||| || || || ||
Sbjct 1826335 AAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGG 1826276
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||| || || || || || || ||| ||| || | || || || || ||
Sbjct 1826275 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAAC 1826216
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| || || | || || |||||||| ||||||||
Sbjct 1826215 CTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644681334360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |