Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 >seq1 Length=4294417 Score = 105 bits (116), Expect = 7e-18 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || || || |||||||||||||| | | || || | || ||| Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| || || |||| | ||||||||||| || ||||| || || || || || Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCT 64412 || ||| ||| ||| || | ||||| || || ||||| || | || | |||| Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATC--CGACGACTCCACCTCCAAGGTGATCGTCT 3810314 Query 64413 TGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAA 64451 ||||||| ||||| || || || || ||||||| ||||| Sbjct 3810313 TGCCGGTTAAAGTCTTCACAAAGATCTGCATTTGAATAA 3810275 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| ||| ||||| || || || ||||| || | || || | |||| ||| Sbjct 3810719 ACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTCCTCA 3810660 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| || ||| | || | ||||| || || |||||||| ||||| || || || Sbjct 3810659 AGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATCCTGA 3810600 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || ||| ||| || | || || | |||||||| | ||| | ||||| Sbjct 3810599 ATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGTCTTT 3810540 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | ||||| ||||| || ||||| Sbjct 3810539 CCCGTGAGGGTTTTAACGAATATCTGCAT 3810511 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | || || || || ||||||||||| || | Sbjct 1826395 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 1826336 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||| ||||| |||| | ||||| || || || || Sbjct 1826335 AAGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGG 1826276 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || || || ||| ||| || | || || || || || Sbjct 1826275 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAAC 1826216 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || || | || || |||||||| |||||||| Sbjct 1826215 CTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644681334360