Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 seq2 91.5 1e-13 >seq1 Length=4294417 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || | || | | | |||||||| |||||||||||||| Sbjct 1826394 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1826335 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||| || ||||||| | || | ||||||||| ||||| || Sbjct 1826334 AGAGTGCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGG 1826275 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | ||||| | ||||| || Sbjct 1826274 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCAATAGTGTCCGAGGACTCAAC 1826216 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || || || || ||||||||||| Sbjct 1826215 CTCAAGGGTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCAT 1826168 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||||||| | ||| | | |||||||| ||||||||||| || || |||||| Sbjct 3810497 CGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCA 3810438 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| ||||| ||||| | | || | ||||| ||||| || || ||||| || ||| Sbjct 3810437 TCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTG 3810378 Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| | |||| || | | || | || || | |||||||||||| | || | Sbjct 3810377 TC-CTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGAT 3810319 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| || || || | ||| || ||||| |||||||| Sbjct 3810318 CGTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCAT 3810283 >seq2 Length=2231275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||||| || || |||| Sbjct 1211846 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCG 1211905 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-- 138538 |||| | |||||||||||| || || ||||| || ||||| ||| | || | ||| Sbjct 1211906 AAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTC-CTGAATCTTGCTCTTAAC 1211964 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||| || | ||||| ||||| | || | || ||||| || || || | Sbjct 1211965 ATTG-TCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGTGTCT 1212023 Query 138599 TTACAAAAATCTGCAT 138614 | || ||||||||||| Sbjct 1212024 TGACGAAAATCTGCAT 1212039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262282137680