Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 seq1 84.2 2e-11 >seq2 Length=2231275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || |||||||| || ||| | | | || || | || Sbjct 1211837 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGC 1211896 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | ||||||||||||||||| || || || |||||||| ||| ||| Sbjct 1211897 TTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTG 1211956 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || ||| | || || ||||| || || || | ||||||||| ||||| || Sbjct 1211957 CTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTG 1212016 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || || ||||| ||||| Sbjct 1212017 AGTGTCTTGACGAAAATCTGCAT 1212039 >seq1 Length=4294417 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/225 (69%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 ||||| | ||| || || || || || || ||||||||||| | | | | | || Sbjct 3810494 AAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCC 3810435 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | ||| || |||||| | ||||| ||||| ||||| |||||| || |||||||| Sbjct 3810434 TCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC 3810375 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| || || ||| | || |||||||| || || || ||||| || || Sbjct 3810374 TGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTC 3810315 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAAT 15189 || || || | ||| || ||||| || ||| ||||| ||||||| Sbjct 3810314 TTGCCGGTTAAAGTCTTCACAAAGATCTGC--ATTTG-AATAAAT 3810273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391917241415