Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 1e-15
seq2 91.5 2e-13
>seq1
Length=4294417
Score = 98.7 bits (108), Expect = 1e-15
Identities = 505/796 (63%), Gaps = 17/796 (2%)
Strand=Plus/Minus
Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559
||||| ||| || || || | ||| | ||||| || || ||| || ||||||||
Sbjct 3285043 TTTGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGGTTGCAGGCATCCTTA 3284984
Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618
|| |||||| |||| || || ||||| ||||| | || | ||| | | ||||| | ||
Sbjct 3284983 TACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTATAATGGAATACCATAGCTTC 3284924
Query 116619 GGCGGCTGGCACAGTGGCGTTGGC-TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCT 116677
| | || | ||| || | | || ||||||| || || | || || || |
Sbjct 3284923 TGAG-CTTTAATGGTG-CGACGACCTCTGCCCTCCTTTTCATATGTCGTATAAAGTTTTT 3284866
Query 116678 CAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737
| ||||| ||||| | | || ||||| ||||| || || ||||| | |||| ||
Sbjct 3284865 CGAACTCCTCACCGTAAACATCAGAGAGACCTGGGCACTCATTGGGACACATTAGAGTCC 3284806
Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797
| | ||| || | ||||||| ||| || | ||| || ||||| || || ||| |
Sbjct 3284805 AGTCCCCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAATCCAAAGTGCAACGAAAA 3284746
Query 116798 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857
||| || ||| ||||| | || ||||| |||| || | || | |
Sbjct 3284745 TATCACGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCACATCAATGGTATCAAAAA 3284686
Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTGCGACGACCAG 116911
|||| | |||||||| || | |||| ||| | | || |||| || |||
Sbjct 3284685 TATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGGTCGCTTGTTACCACCT- 3284627
Query 116912 CCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAG 116971
|||| ||||| | || || || | || || | ||| ||||| | |||| |
Sbjct 3284626 --TGGTCAACATAGCGAGCAGTATTATTGTAGACACGCAACATGGGAATAAGCCCATTGG 3284569
Query 116972 ATTGGCCATTTGTCCCC-CGAA-TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCAT 117029
| |||||||| || ||| || ||| | |||| | | | ||| || |
Sbjct 3284568 AAGTACCATTTGTACCAGCGATGTAAGAGCCCG--TGGCACGAATGTTGTGAATACTGAG 3284511
Query 117030 ACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCC 117089
||||| || || || |||||| || || || ||| |||| | | ||||| ||
Sbjct 3284510 GCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTCCTTGAGCGTATCATAGATACC 3284451
Query 117090 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 117149
||| || ||| |||| | | | | ||||||| |||||||||||| |||| ||
Sbjct 3284450 ATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTTGTGGCTTTGGAGT 3284391
Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTA 117209
|| || ||| |||||||||| | || || ||||| ||| |||||| | |||
Sbjct 3284390 TCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTATTTTTGTGACATCCATTGGTA 3284331
Query 117210 GGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269
||| || | |||| || || || || || || ||||| | | || | ||| | |||
Sbjct 3284330 GGTTTCGAGAACAGCTGGGATATCCTCGCCATGGATACCCACGGCAACTCTCATTATCAT 3284271
Query 117270 GTATTGGGGTGTTTCC 117285
|| || ||| |||||
Sbjct 3284270 GTGCTGAGGTCTTTCC 3284255
>seq2
Length=2231275
Score = 91.5 bits (100), Expect = 2e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | |||||| || || |||||||| ||||| ||||| ||| ||
Sbjct 2160494 GCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGCCCA 2160553
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| || ||||| | ||||||||| | || || ||| ||||||||
Sbjct 2160554 GGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAGACG 2160613
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677
||||| | ||| || || | |||||||| |||||
Sbjct 2160614 CCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAA 2160651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507054292040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |