Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 seq2 91.5 2e-13 >seq1 Length=4294417 Score = 98.7 bits (108), Expect = 1e-15 Identities = 505/796 (63%), Gaps = 17/796 (2%) Strand=Plus/Minus Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 ||||| ||| || || || | ||| | ||||| || || ||| || |||||||| Sbjct 3285043 TTTGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGGTTGCAGGCATCCTTA 3284984 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || |||||| |||| || || ||||| ||||| | || | ||| | | ||||| | || Sbjct 3284983 TACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTATAATGGAATACCATAGCTTC 3284924 Query 116619 GGCGGCTGGCACAGTGGCGTTGGC-TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCT 116677 | | || | ||| || | | || ||||||| || || | || || || | Sbjct 3284923 TGAG-CTTTAATGGTG-CGACGACCTCTGCCCTCCTTTTCATATGTCGTATAAAGTTTTT 3284866 Query 116678 CAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737 | ||||| ||||| | | || ||||| ||||| || || ||||| | |||| || Sbjct 3284865 CGAACTCCTCACCGTAAACATCAGAGAGACCTGGGCACTCATTGGGACACATTAGAGTCC 3284806 Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797 | | ||| || | ||||||| ||| || | ||| || ||||| || || ||| | Sbjct 3284805 AGTCCCCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAATCCAAAGTGCAACGAAAA 3284746 Query 116798 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857 ||| || ||| ||||| | || ||||| |||| || | || | | Sbjct 3284745 TATCACGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCACATCAATGGTATCAAAAA 3284686 Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTGCGACGACCAG 116911 |||| | |||||||| || | |||| ||| | | || |||| || ||| Sbjct 3284685 TATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGGTCGCTTGTTACCACCT- 3284627 Query 116912 CCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAG 116971 |||| ||||| | || || || | || || | ||| ||||| | |||| | Sbjct 3284626 --TGGTCAACATAGCGAGCAGTATTATTGTAGACACGCAACATGGGAATAAGCCCATTGG 3284569 Query 116972 ATTGGCCATTTGTCCCC-CGAA-TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCAT 117029 | |||||||| || ||| || ||| | |||| | | | ||| || | Sbjct 3284568 AAGTACCATTTGTACCAGCGATGTAAGAGCCCG--TGGCACGAATGTTGTGAATACTGAG 3284511 Query 117030 ACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCC 117089 ||||| || || || |||||| || || || ||| |||| | | ||||| || Sbjct 3284510 GCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTCCTTGAGCGTATCATAGATACC 3284451 Query 117090 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 117149 ||| || ||| |||| | | | | ||||||| |||||||||||| |||| || Sbjct 3284450 ATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTTGTGGCTTTGGAGT 3284391 Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTA 117209 || || ||| |||||||||| | || || ||||| ||| |||||| | ||| Sbjct 3284390 TCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTATTTTTGTGACATCCATTGGTA 3284331 Query 117210 GGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269 ||| || | |||| || || || || || || ||||| | | || | ||| | ||| Sbjct 3284330 GGTTTCGAGAACAGCTGGGATATCCTCGCCATGGATACCCACGGCAACTCTCATTATCAT 3284271 Query 117270 GTATTGGGGTGTTTCC 117285 || || ||| ||||| Sbjct 3284270 GTGCTGAGGTCTTTCC 3284255 >seq2 Length=2231275 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||| || || |||||||| ||||| ||||| ||| || Sbjct 2160494 GCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGAGAACGTCAGCCCA 2160553 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| || ||||| | ||||||||| | || || ||| |||||||| Sbjct 2160554 GGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCCACTGAAGAAGACG 2160613 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 ||||| | ||| || || | |||||||| ||||| Sbjct 2160614 CCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAA 2160651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507054292040