Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2 127 5e-24 seq1 127 5e-24 >seq2 Length=2231275 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||| || || |||||||| |||| ||||||||||| | || Sbjct 1211819 CGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 1211878 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||||||||| | |||||| ||||| || || || Sbjct 1211879 CGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCC 1211938 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| || |||| ||| || | | || || || | Sbjct 1211939 TCCTTGTCCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGG 1211998 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||||||||| || || || ||||| || Sbjct 1211999 GTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTG 1212036 >seq1 Length=4294417 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 || ||||||||| || || || ||||| |||| |||||||||| | |||||| || || Sbjct 3810723 CAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTC 3810664 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 || |||||||| || || ||||| | ||||| || || ||| ||| ||||| || Sbjct 3810663 CTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATC 3810604 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||||||| |||||| || | |||||| | | || || || | |||||||| Sbjct 3810603 CTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGT 3810544 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| |||||||| ||||| || || || || Sbjct 3810543 CTTTCCCGTGAGGGTTTTAACGAATATCTG 3810514 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || || || ||||| |||||||| || | |||||| |||| |||||| | ||||| || Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 || ||||| || ||||| || | ||||||||||| || ||| || || |||||| Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 |||||| |||||| |||| || || | | || || ||||| ||||||||||| Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTG 3810312 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || || | ||| |||||||| || || Sbjct 3810311 CCGGTTAAAGTCTTCACAAAGATCTG 3810286 Score = 114 bits (126), Expect = 3e-20 Identities = 162/227 (71%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || |||||||| || | ||||||||||| | ||| Sbjct 1826388 CGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTG 1826329 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| || | |||||| || ||||| ||||| Sbjct 1826328 CGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCC 1826269 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || || | ||||| | | || || || | Sbjct 1826268 TCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGG 1826209 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || |||||||||||||| || || || ||||| || |||||| Sbjct 1826208 GTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTG---CATTTT 1826165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921313006273