Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 5e-24
seq1 127 5e-24
>seq2
Length=2231275
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| ||||| || || |||||||| |||| ||||||||||| | ||
Sbjct 1211819 CGAAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 1211878
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||||||||||||||| | |||||| ||||| || || ||
Sbjct 1211879 CGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGGATACCC 1211938
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| || |||| ||| || | | || || || |
Sbjct 1211939 TCCTTGTCCTGAATCTTGCTCTTAACATTGTCGATGGTATCCGAGGACTCAACCTCAAGG 1211998
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||||||||| || || || ||||| ||
Sbjct 1211999 GTAATGGTCTTACCCGTGAGTGTCTTGACGAAAATCTG 1212036
>seq1
Length=4294417
Score = 127 bits (140), Expect = 5e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||||||||| || || || ||||| |||| |||||||||| | |||||| || ||
Sbjct 3810723 CAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGAGAGAGTCCTACCGTC 3810664
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|| |||||||| || || ||||| | ||||| || || ||| ||| ||||| ||
Sbjct 3810663 CTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGGAATACCTTCCTTATC 3810604
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| |||||| || | |||||| | | || || || | ||||||||
Sbjct 3810603 CTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCACTTCGAGAGTGATCGT 3810544
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| |||||||| ||||| || || || ||
Sbjct 3810543 CTTTCCCGTGAGGGTTTTAACGAATATCTG 3810514
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480
|| || || ||||| |||||||| || | |||||| |||| |||||| | ||||| ||
Sbjct 3810491 ACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCATCCTCA 3810432
Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540
|| ||||| || ||||| || | ||||||||||| || ||| || || ||||||
Sbjct 3810431 AGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGA 3810372
Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600
|||||| |||||| |||| || || | | || || ||||| |||||||||||
Sbjct 3810371 ATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATCGTCTTG 3810312
Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || | ||| |||||||| || ||
Sbjct 3810311 CCGGTTAAAGTCTTCACAAAGATCTG 3810286
Score = 114 bits (126), Expect = 3e-20
Identities = 162/227 (71%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || |||||||| || |||||||| || | ||||||||||| | |||
Sbjct 1826388 CGCAGACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTG 1826329
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| |||||||| || | |||||| || ||||| |||||
Sbjct 1826328 CGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCC 1826269
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || || | ||||| | | || || || |
Sbjct 1826268 TCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGG 1826209
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || |||||||||||||| || || || ||||| || ||||||
Sbjct 1826208 GTAATGGTCTTACCCGTGAGGGTCTTAACGAAAATCTG---CATTTT 1826165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921313006273
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |