Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 4e-21
seq2 98.7 1e-15
>seq1
Length=4294417
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||| || || | || |||||| || || |||||||| || |||||||| |
Sbjct 1826383 ACGCAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGGCC 1826324
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| ||||||||||| |||||||| ||||| ||||| || || | || | | ||||||
Sbjct 1826323 ATCCTCGAGCTGCTTACCGGCGAAAATCAAACGCTGTTGATCCGGGGGGATTCCCTCCTT 1826264
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||| || || || || | || ||
Sbjct 1826263 GTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAGGACTCAACCTCAAGGGTAAT 1826204
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
||| || ||||| || || ||||| || || ||||||||
Sbjct 1826203 GGTCTTACCCGTGAGGGTCTTAACGAAAATCTGCATTTT 1826165
Score = 104 bits (114), Expect = 3e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||| || ||||||| || |||||| || || ||||| || || | ||| || |
Sbjct 3810497 CGCAAAACGAGATGCAGAGTGGACTCCTTCTGAATGTTGTAATCAGACAAAGTACGGCCA 3810438
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || || ||||| || ||||| ||||| ||||||||||| | || | | |||||||
Sbjct 3810437 TCCTCAAGTTGCTTACCAGCGAAAATCAATCGCTGCTGGTCAGGTGGAATACCCTCCTTG 3810378
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | || || ||| ||||| |||| |||||
Sbjct 3810377 TCCTGAATCTTTGACTTCACATTATCGATAGTATCCGACGACTCCACCTCCAAGGTGATC 3810318
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTT 46595
|| ||||| || | || || |||||||| |||||||
Sbjct 3810317 GTCTTGCCGGTTAAAGTCTTCACAAAGATCTGCATTT 3810281
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425
||| || | ||||||||| || || || | || ||||| |||||||||||||| ||
Sbjct 3810738 GCCACCACGTAAACGCAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTGTAGTCAGA 3810679
Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485
||||| | |||| || |||||||| || || || ||||| ||||| || || | ||
Sbjct 3810678 GAGAGTCCTACCGTCCTCAAGCTGCTTACCAGCAAAGATCAATCGCTGTTGATCAGGAGG 3810619
Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545
| | ||||| ||| ||||| ||| | | | | ||||| || |||||
Sbjct 3810618 AATACCTTCCTTATCCTGAATCTTGGACTTCACATTGTCAATGGTGTCCGAAGACTCCAC 3810559
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | ||||| || || ||||| || |||||||| || || |||||
Sbjct 3810558 TTCGAGAGTGATCGTCTTTCCCGTGAGGGTTTTAACGAATATCTGCAT 3810511
>seq2
Length=2231275
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| | || ||||||||||| ||||||||
Sbjct 1211848 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAA 1211907
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||| ||||| | || | | |||||||||| ||||| |||| | |
Sbjct 1211908 GATCAAACGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGCTCTTAACATT 1211967
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || || || || || || | || ||||| || ||||| || || || ||
Sbjct 1211968 GTCGATGGTATCCGAGGACTCAACCTCAAGGGTAATGGTCTTACCCGTGAGTGTCTTGAC 1212027
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 1212028 GAAAATCTGCAT 1212039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238265755880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |