Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01]
19 sequences; 9,313,034 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 206 3e-48
seq1 113 5e-20
>seq2
Length=2231275
Score = 206 bits (228), Expect = 3e-48
Identities = 423/620 (68%), Gaps = 19/620 (3%)
Strand=Plus/Plus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| | ||| ||||| ||| |||| ||||| || | || ||||| || ||
Sbjct 2160481 GAACAAGACGCATGCAAAATCGGTGTGCATACCCTCATCTCGTGAGATGAGCTCATTAGA 2160540
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| |||| || |||||||| || ||||| |||||||| || |||| |||||| ||
Sbjct 2160541 GAACGTCAGCCCAGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGACCC 2160600
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064
|||||||||||||| | |||||| ||||| || || ||||| | || || | ||
Sbjct 2160601 ACTGAAGAAGACGCCCTCAATGGCCGCAAAAGCGACAAGACGCTCAGCAAAAGTAACGTC 2160660
Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG---CATCGT 133121
| || | ||||||||| || ||||| |||||| ||||| || | || || ||
Sbjct 2160661 TCTGTCGTTGATCCAGCGAAGAGCCCAGTCGGCC--TTCTT--GCGGATGGGCCCAATGT 2160716
Query 133122 T-TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGA 133177
| ||||| || || |||||| || |||| || | | | ||||| || |
Sbjct 2160717 TATCGATTGCATTAAACAAA---TAATTAGCTTCTTTGGGATCCTTAATATAGGTATCAA 2160773
Query 133178 TGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGC 133237
| || || ||| | || ||||| | ||||| || || || ||||| |||||||
Sbjct 2160774 TTAGTAGTGAGTACGTCTCAGAGTGGATATTCTCAATCATTATCTGGAAGCCATAAAAGC 2160833
Query 133238 ACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGA 133297
|| |||||| | ||| || || | | |||| | |||| |||||||||||||
Sbjct 2160834 ACTTAGCCTCGGGGATCTGGACGTCGTCACTGAAATTTTGTACCAAGTTTTCGTTGACGA 2160893
Query 133298 TGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGT 133357
| |||||| || ||||||||||| ||||| | ||||||| || || | | |
Sbjct 2160894 TACCGTCGGATGCCGCGAAAAAGGCAAGCACACGGGAAATGAAATAACGTTCATCAGCAT 2160953
Query 133358 TCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAA 133414
||| | | ||||||||| | ||||||| |||||| | ||||||| |||||||||
Sbjct 2160954 TCATACGATGTTCCCAGTCGTGAAGGTCCTTGCCCAGGTCGATCTCCTCGGCGGTCCAAA 2161013
Query 133415 ACGACGCCTCGGCTTTTTTGTACATACT-CCACATGTCCGAATATTGTATGGGAAAAATC 133473
| |||||| || |||||||| | || ||| || || || | || || || |||
Sbjct 2161014 AACTCGCCTCTGCCTTTTTGTA-GTGCTGCCAGATCTCGTGGTACTTGATCGGGAACATC 2161072
Query 133474 ACAAACCGGCGGGGGTTTTC 133493
||||||| | ||||| ||
Sbjct 2161073 ACAAACCTATGTGGGTTCTC 2161092
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || |||||||| || ||||| ||| | || || ||| || |
Sbjct 1212039 ATGCAGATTTTCGTCAAGACACTCACGGGTAAGACCATTACCCTTGAGGTTGAGTCCTCG 1211980
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | |||| || || | ||||| ||||| || ||| | ||||||
Sbjct 1211979 GATACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 1211920
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| || || ||||| || || | ||||||||| |||||||||
Sbjct 1211919 CAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCCTCTCTGACTACAAC 1211860
Query 38424 ATCCAAAAGGA 38434
||||| |||||
Sbjct 1211859 ATCCAGAAGGA 1211849
>seq1
Length=4294417
Score = 113 bits (124), Expect = 5e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298
|||||||||| || ||||| || || |||||||| || ||||| ||| | || || |||
Sbjct 1826163 AAAAAATGCAGATTTTCGTTAAGACCCTCACGGGTAAGACCATTACCCTTGAGGTTGAGT 1826222
Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| | |||| | | | | || || |||| ||||| |||||||| ||| | |
Sbjct 1826223 CCTCGGACACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGG 1826282
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
| |||||||| | |||| ||| || || ||||| || || | ||||| || ||||
Sbjct 1826283 ATCAACAGCGTTTGATTTTCGCCGGTAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACT 1826342
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| || ||||| | || || || | ||||||||| || | || ||
Sbjct 1826343 ACAACATTCAGAAGGAGTCCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 1826394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172681208960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |